• using R version 2.10.0 alpha (2009-10-01 r49916)
• using session charset: ASCII
• checking for file 'VGAM/DESCRIPTION' ... OK
• this is package 'VGAM' version '0.7-9'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'VGAM' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  Coef.qrrvglm: no visible binding for global variable 'optimum'
  Coef.qrrvglm: no visible binding for global variable 'Darray'
  Coef.qrrvglm: no visible binding for global variable 'Tolerance'
  callcqof: no visible binding for '<<-' assignment to
  '.VGAM.CQO.cmatrix'
  callcqof: no visible binding for '<<-' assignment to
  '.VGAM.CQO.ocmatrix'
  calldcaof: no visible binding for global variable 'p1'
  calldcaof: no visible binding for global variable 'U'
  calldcaof: no visible binding for global variable 'queue'
  calldcaof: no visible binding for global variable 'qbig'
  calldcaof: no visible binding for global variable 'spar2'
  calldcaof: no visible binding for global variable 'df2.nl'
  cao.fit: no visible binding for global variable 'maxitl'
  cao.fit: no visible binding for global variable 'fv'
  cqo.fit: no visible binding for global variable 'modelno'
  cqo.fit: no visible binding for global variable 'quasi.newton'
  cqo.fit: no visible binding for global variable 'NOS'
  cqo.fit: no visible binding for global variable 'z'
  cqo.fit: no visible binding for global variable 'fv'
  loglinb3 : <anonymous>: no visible binding for global variable 'u3'
  loglinb3 : <anonymous>: no visible binding for global variable 'u2'
  loglinb3 : <anonymous>: no visible binding for global variable 'u23'
  loglinb3 : <anonymous>: no visible binding for global variable 'u1'
  loglinb3 : <anonymous>: no visible binding for global variable 'u13'
  loglinb3 : <anonymous>: no visible binding for global variable 'u12'
  loglinb3 : <anonymous>: no visible binding for global variable 'denom'
  rrvglm.fit: no visible binding for global variable 'modelno'
  rrvglm.fit: no visible binding for global variable 'fv'
  rrvglm.fit: no visible binding for global variable 'one.more'
  rrvglm.fit: no visible binding for global variable 'rrr.expression'
  uqo.fit: no visible binding for global variable 'CQO.FastAlgorithm'
  vgam.fit: no visible binding for global variable 'fv'
  vglm.fit: no visible binding for global variable 'fv'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... WARNING
  Missing link(s) in documentation object './man/multinomial.Rd':
  '[base]{iris}'
  
  Missing link(s) in documentation object './man/smartpred.Rd':
  '[base]{poly}'
  
  Missing link(s) in documentation object './man/zinegbinomial.Rd':
  '[stats:negative binomial]{rpois}'
  
  Suspect link(s) in documentation object './man/dirmul.old.Rd':
  '[base]{choose}'
  
  Suspect link(s) in documentation object './man/dirmultinomial.Rd':
  '[base]{choose}'
  
  Suspect link(s) in documentation object './man/erlang.Rd':
  '[stats]{rgamma}'
  
  Suspect link(s) in documentation object './man/fitted.vlm.Rd':
  '[stats]{fitted}'
  
  Suspect link(s) in documentation object './man/gamma1.Rd':
  '[stats]{rgamma}'
  
  Suspect link(s) in documentation object './man/gamma2.ab.Rd':
  '[stats]{rgamma}'
  
  Suspect link(s) in documentation object './man/gaussianff.Rd':
  '[stats]{gaussian}'
  
  Suspect link(s) in documentation object './man/hyperg.Rd':
  '[base]{lgamma}'
  
  Suspect link(s) in documentation object './man/lognormal.Rd':
  '[stats]{rlnorm}'
  
  Suspect link(s) in documentation object './man/mix2poisson.Rd':
  '[stats]{dpois}'
  
  Suspect link(s) in documentation object './man/poissonff.Rd':
  '[stats]{poisson}'
  
  Suspect link(s) in documentation object './man/quasibinomialff.Rd':
  '[stats]{quasibinomial}'
  
  Suspect link(s) in documentation object './man/quasipoissonff.Rd':
  '[stats]{quasipoisson}'
  
  See the information in section 'Cross-references' of the 'Writing R
  Extensions' manual.
  
  'Suspect' links are those of the form \link[pkg]{a} where 'a' exists as
  an alias but not as a filename -- such links will not work in R <
  2.10.0, and only in HTML (not PDF) help in current versions.
  
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
• elapsed time (check, wall clock): 9:41