• using R version 2.15.0 alpha (2012-03-07 r58630)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'SRPM/DESCRIPTION' ... OK
• this is package 'SRPM' version '0.1-6'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package 'SRPM' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File 'SRPM/R/zzz.R':
  .onLoad calls:
  require(pkg, quietly = TRUE, character.only = TRUE)
  
  Package startup functions should not change the search path.
  See section 'Good practice' in ?.onAttach.
  
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under 'inst/doc' ... OK
• checking installed files from 'inst/doc' ... NOTE
  The following files are already in R: 'jss.bst'
  Please remove them from your package.
  The following files should probably not be installed:
  'SRPM.tex'
  
  Consider the use of a .Rinstignore file: see 'Writing R Extensions',
  or move the vignette sources from 'inst/doc' to 'vignettes'.
• checking examples ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ... OK
  Running 'reg-tests.R'
  Comparing 'reg-tests.Rout' to 'reg-tests.Rout.save' ...9c9
  < [1] "/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/SRPM.Rcheck/SRPM/SRP-ex/srp_simple"
  ---
  > [1] "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple"
  24c24
  < .. .. ..@ dir : chr "/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/SRPM.Rcheck/SRPM/SRP-ex/srp_simple/cacheDB/FitL"| __truncated__
  ---
  > .. .. ..@ dir : chr "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel"
  40,41c40,41
  < % latex table generated in R 2.15.0 by xtable 1.7-0 package
  < % Thu Mar 8 15:07:28 2012
  ---
  > % latex table generated in R 2.12.0 by xtable 1.5-6 package
  > % Mon Apr 12 11:22:33 2010
  62,63c62,63
  < % latex table generated in R 2.15.0 by xtable 1.7-0 package
  < % Thu Mar 8 15:07:28 2012
  ---
  > % latex table generated in R 2.12.0 by xtable 1.5-6 package
  > % Mon Apr 12 11:22:33 2010
  115,116c115,116
  < % latex table generated in R 2.15.0 by xtable 1.7-0 package
  < % Thu Mar 8 15:07:28 2012
  ---
  > % latex table generated in R 2.12.0 by xtable 1.5-6 package
  > % Mon Apr 12 11:22:33 2010
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  '/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/SRPM.Rcheck/00check.log'
  for details.
• elapsed time (check, wall clock): 0:34