• using R version 2.15.3 (2013-03-01)
  • using platform: i386-apple-darwin9.8.0 (32-bit)
  • using session charset: ASCII
  • checking for file 'DeducerExtras/DESCRIPTION' ... OK
  • checking extension type ... Package
  • this is package 'DeducerExtras' version '1.7'
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package 'DeducerExtras' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... WARNING
    Loading required package: Deducer
    Loading required package: rJava
    Loading required package: methods
    Loading required package: ggplot2
    Loading required package: stats
    Loading required package: scales
    Loading required package: JGR
    Loading required package: JavaGD
    Loading required package: iplots
    Error : .onLoad failed in loadNamespace() for 'iplots', details:
    call: fun(libname, pkgname)
    error: could not find function "dev.off"
    Error: package 'iplots' could not be loaded
    Execution halted

    It looks like this package (or one of its dependent packages) has an
    unstated dependence on a standard package. All dependencies must be
    declared in DESCRIPTION.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
  • checking whether the package can be unloaded cleanly ... WARNING
    Error : .onLoad failed in loadNamespace() for 'iplots', details:
    call: fun(libname, pkgname)
    error: could not find function "dev.off"
    Error: package 'iplots' could not be loaded
    Execution halted
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... WARNING
    Error: package 'iplots' could not be loaded
    Call sequence:
    7: stop(gettextf("package %s could not be loaded", sQuote(pkg)),
    call. = FALSE, domain = NA)
    6: .getRequiredPackages2(pkgInfo, quietly = quietly)
    5: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc)
    4: .getRequiredPackages2(pkgInfo, quietly = quietly)
    3: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc)
    2: .getRequiredPackages2(pkgInfo, quietly = quietly)
    1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE)
    Execution halted
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
  • checking S3 generic/method consistency ... WARNING
    2013-03-28 03:31:20.132 R[38210:613] Process manager already initialized -- can't fully enable headless mode.
    See section 'Generic functions and methods' of the 'Writing R
    Extensions' manual.
  • checking replacement functions ... WARNING
    2013-03-28 03:31:24.163 R[38213:613] Process manager already initialized -- can't fully enable headless mode.
    The argument of a replacement function which corresponds to the right
    hand side must be named 'value'.
  • checking foreign function calls ... NOTE
    2013-03-28 03:31:27.395 R[38216:613] Process manager already initialized -- can't fully enable headless mode.
    See the chapter 'System and foreign language interfaces' of the
    'Writing R Extensions' manual.
  • checking R code for possible problems ... NOTE
    2013-03-28 03:31:31.232 R[38229:613] Process manager already initialized -- can't fully enable headless mode.
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... WARNING
    2013-03-28 03:31:40.325 R[38245:613] Process manager already initialized -- can't fully enable headless mode.
    All user-level objects in a package should have documentation entries.
    See the chapter 'Writing R documentation files' in the 'Writing R
    Extensions' manual.
  • checking for code/documentation mismatches ... WARNING
    2013-03-28 03:31:43.469 R[38248:613] Process manager already initialized -- can't fully enable headless mode.
    2013-03-28 03:31:46.651 R[38251:613] Process manager already initialized -- can't fully enable headless mode.
    2013-03-28 03:31:49.782 R[38254:613] Process manager already initialized -- can't fully enable headless mode.
  • checking Rd \usage sections ... NOTE
    2013-03-28 03:31:53.124 R[38260:613] Process manager already initialized -- can't fully enable headless mode.
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter 'Writing R documentation files' in the 'Writing R
    Extensions' manual.
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... NONE
  • checking PDF version of manual ... OK
    WARNING: There were 7 warnings.
    NOTE: There were 3 notes.
    See
    '/Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/DeducerExtras.Rcheck/00check.log'
    for details.
  • elapsed time (check, wall clock): 1:05