• using R version 2.9.0 (2009-04-17)
  • using session charset: ASCII
  • checking for file 'CarbonEL/DESCRIPTION' ... OK
  • this is package 'CarbonEL' version '0.1-4'
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'CarbonEL' can be installed ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking for unstated dependencies in R code ... WARNING
    2009-04-20 18:15:50.946 R[22633] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.236847105'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:50.946 R[22633] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.236847105)
    CFMessagePortCreateLocal failed (name = Processes-0.236847105 error = 0)
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
  • checking S3 generic/method consistency ... WARNING
    2009-04-20 18:15:51.190 R[22635] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.236978177'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:51.190 R[22635] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.236978177)
    CFMessagePortCreateLocal failed (name = Processes-0.236978177 error = 0)
    See section 'Generic functions and methods' of the 'Writing R Extensions'
    manual.
  • checking replacement functions ... WARNING
    2009-04-20 18:15:51.435 R[22637] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237109249'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:51.436 R[22637] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237109249)
    CFMessagePortCreateLocal failed (name = Processes-0.237109249 error = 0)
    In R, the argument of a replacement function which corresponds to the right
    hand side must be named 'value'.
  • checking foreign function calls ... WARNING
    2009-04-20 18:15:51.681 R[22639] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237240321'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:51.682 R[22639] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237240321)
    CFMessagePortCreateLocal failed (name = Processes-0.237240321 error = 0)
    See the chapter 'System and foreign language interfaces' of the 'Writing R
    Extensions' manual.
  • checking R code for possible problems ... NOTE
    2009-04-20 18:15:52.111 R[22644] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237371393'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:52.111 R[22644] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237371393)
    CFMessagePortCreateLocal failed (name = Processes-0.237371393 error = 0)
    2009-04-20 18:15:52.483 R[22646] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237502465'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:52.484 R[22646] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237502465)
    CFMessagePortCreateLocal failed (name = Processes-0.237502465 error = 0)
  • checking Rd files ... OK
  • checking Rd files against version 2 parser ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... WARNING
    2009-04-20 18:15:53.209 R[22657] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237633537'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:53.209 R[22657] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237633537)
    CFMessagePortCreateLocal failed (name = Processes-0.237633537 error = 0)
    All user-level objects in a package should have documentation entries.
    See the chapter 'Writing R documentation files' in manual 'Writing R
    Extensions'.
  • checking for code/documentation mismatches ... WARNING
    2009-04-20 18:15:53.489 R[22659] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237764609'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:53.490 R[22659] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237764609)
    CFMessagePortCreateLocal failed (name = Processes-0.237764609 error = 0)
    2009-04-20 18:15:53.734 R[22661] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.237895681'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:53.735 R[22661] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.237895681)
    CFMessagePortCreateLocal failed (name = Processes-0.237895681 error = 0)
    2009-04-20 18:15:53.979 R[22663] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.238026753'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:53.980 R[22663] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.238026753)
    CFMessagePortCreateLocal failed (name = Processes-0.238026753 error = 0)
  • checking Rd \usage sections ... NOTE
    2009-04-20 18:15:54.458 R[22669] CFLog (0): CFMessagePort: bootstrap_register(): failed 1100 (0x44c), port = 0x1f03, name = 'Processes-0.238157825'
    See /usr/include/servers/bootstrap_defs.h for the error codes.
    2009-04-20 18:15:54.458 R[22669] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (Processes-0.238157825)
    CFMessagePortCreateLocal failed (name = Processes-0.238157825 error = 0)
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter 'Writing R documentation files' in manual 'Writing R
    Extensions'.
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $BLAS_LIBS ... OK
  • checking examples ... ERROR
    Running examples in 'CarbonEL-Ex.R' failed.
  • elapsed time (check, wall clock): 0:09