* installing *source* package ‘mrfDepth’ ... ** package ‘mrfDepth’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c AdjOutlyingness.cpp -o AdjOutlyingness.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c Auxiliary.f -o Auxiliary.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c Bagplot.f -o Bagplot.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepth2D.f -o HalfSpaceDepth2D.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthContour2D.f -o HalfSpaceDepthContour2D.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthDeepestLoc.f -o HalfSpaceDepthDeepestLoc.o f951: Warning: Nonconforming tab character in column 1 of line 136 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 140 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 141 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 143 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 147 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 148 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 150 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 153 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 155 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 156 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 158 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 161 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 162 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 163 [-Wtabs] HalfSpaceDepth2D.f:329:25: 329 | IF(N.GE.3) SDEP = (NUMS+0.0)/(K(N,3)+0.0) | 1 Warning: Possible change of value in conversion from INTEGER(8) to REAL(4) at (1) [-Wconversion] HalfSpaceDepth2D.f:329:36: 329 | IF(N.GE.3) SDEP = (NUMS+0.0)/(K(N,3)+0.0) | 1 Warning: Possible change of value in conversion from INTEGER(8) to REAL(4) at (1) [-Wconversion] HalfSpaceDepthContour2D.f:110:2: 110 | 10 CALL checkData2D(X,Y,N,fac,NCIRQ,MCIRQ,ANGLE, | 1 Warning: Label 10 at (1) defined but not used [-Wunused-label] HalfSpaceDepthContour2D.f:674:3: 674 | 200 CONTINUE | 1 Warning: Label 200 at (1) defined but not used [-Wunused-label] Bagplot.f:1012:4: 1012 | 1431 jk=0 | 1 Warning: Label 1431 at (1) defined but not used [-Wunused-label] Bagplot.f:960:4: 960 | 1398 if (ntot.gt.nsub) then | 1 Warning: Label 1398 at (1) defined but not used [-Wunused-label] Bagplot.f:536:3: 536 | 207 if (xdev.gt.eps) then | 1 Warning: Label 207 at (1) defined but not used [-Wunused-label] Bagplot.f:368:2: 368 | 37 if (notingp.eq.1) then | 1 Warning: Label 37 at (1) defined but not used [-Wunused-label] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthMedian.f -o HalfSpaceDepthMedian.o HalfSpaceDepthMedian.f:25:47: 25 | DOUBLE PRECISION sum,tukmed(2),fac,wx1(N),wy1(N),rand(2) | 1 Warning: Unused variable ‘wx1’ declared at (1) [-Wunused-variable] HalfSpaceDepthMedian.f:25:54: 25 | DOUBLE PRECISION sum,tukmed(2),fac,wx1(N),wy1(N),rand(2) | 1 Warning: Unused variable ‘wy1’ declared at (1) [-Wunused-variable] HalfSpaceDepthMedian.f:21:28: 21 | DOUBLE PRECISION X2(N),Y2(N) | 1 Warning: Unused variable ‘x2’ declared at (1) [-Wunused-variable] HalfSpaceDepthMedian.f:21:34: 21 | DOUBLE PRECISION X2(N),Y2(N) | 1 Warning: Unused variable ‘y2’ declared at (1) [-Wunused-variable] HalfSpaceDepthDeepestLoc.f:735:10: 735 | 200 if (dabs(aw(indl+1)-u).le.eps) then | ^ Warning: ‘indl’ may be used uninitialized [-Wmaybe-uninitialized] HalfSpaceDepthDeepestLoc.f:687:30: 687 | integer indge,indle,indl,indg,j,imax,imin | ^ note: ‘indl’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthND.f -o HalfSpaceDepthND.o HalfSpaceDepthContour2D.f:435:72: 435 | 79 DO 80 I=J+1,M-1 | ^ Warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] HalfSpaceDepthContour2D.f:314:47: 314 | INTEGER HDEP1,HDEP2,HDEP3,HDEP4,HDEP5,I,J,L,M | ^ note: ‘j’ was declared here HalfSpaceDepthContour2D.f:645:51: 645 | if ((dabs(xcord1-xcord).le.eps).and. | ^ Warning: ‘ycord1’ may be used uninitialized [-Wmaybe-uninitialized] HalfSpaceDepthContour2D.f:319:36: 319 | DOUBLE PRECISION xcord1,ycord1 | ^ note: ‘ycord1’ was declared here HalfSpaceDepthContour2D.f:645:51: 645 | if ((dabs(xcord1-xcord).le.eps).and. | ^ Warning: ‘xcord1’ may be used uninitialized [-Wmaybe-uninitialized] HalfSpaceDepthContour2D.f:319:29: 319 | DOUBLE PRECISION xcord1,ycord1 | ^ note: ‘xcord1’ was declared here HalfSpaceDepthND.f:166:4: 166 | 300 END | 1 Warning: Label 300 at (1) defined but not used [-Wunused-label] HalfSpaceDepthND.f:307:11: 307 | I=N*RAN(1)+1. | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] HalfSpaceDepthND.f:312:11: 312 | L=N*RAN(1)+1. | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfspaceDepth3D.f -o HalfspaceDepth3D.o HalfSpaceDepthDeepestLoc.f:116:33: 116 | INTEGER ntave,nalt,nback,lj,mold | ^ Warning: ‘lj’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:212:72: 212 | Z(I)=Z(I)-W | ^ Warning: ‘w’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:150:28: 150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS | ^ note: ‘w’ was declared here HalfspaceDepth3D.f:211:72: 211 | Y(I)=Y(I)-V | ^ Warning: ‘v’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:150:26: 150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS | ^ note: ‘v’ was declared here HalfspaceDepth3D.f:210:72: 210 | X(I)=X(I)-U | ^ Warning: ‘u’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:150:24: 150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS | ^ note: ‘u’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c LinAlg.f -o LinAlg.o LinAlg.f:509:72: 509 | do 360 k = 1, l | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 360 at (1) LinAlg.f:587:72: 587 | DO 10 NC=1,MAXP | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) LinAlg.f:666:72: 666 | DO 160 JNCC=JBEGX,JENDX | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 160 at (1) LinAlg.f:674:72: 674 | DO 190 NC=1,MAXP | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 190 at (1) LinAlg.f:604:3: 604 | 50 IF((LDEL-LCLPL)/=0) THEN | 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] LinAlg.f:109:41: 109 | subroutine eigen(nm,n,a,w,z,fv1,fv2,ierr) | 1 Warning: Unused dummy argument ‘fv2’ at (1) [-Wunused-dummy-argument] clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c Outlyingness.cpp -o Outlyingness.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c Random.f -o Random.o LinAlg.f:33:24: 33 | INTEGER W(1),I,J,K,L,M,N,P | ^ Warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] Random.f:434:5: 434 | 9000 CONTINUE | 1 Warning: Label 9000 at (1) defined but not used [-Wunused-label] LinAlg.f:319:72: 319 | p = -s * s2 * c3 * el1 * e(l) / dl1 | ^ Warning: ‘s2’ may be used uninitialized [-Wmaybe-uninitialized] LinAlg.f:188:53: 188 | double precision c,c2,c3,dl1,el1,f,g,h,p,r,s,s2,tst1,tst2,pythag | ^ note: ‘s2’ was declared here LinAlg.f:319:72: 319 | p = -s * s2 * c3 * el1 * e(l) / dl1 | ^ Warning: ‘c3’ may be used uninitialized [-Wmaybe-uninitialized] LinAlg.f:188:30: 188 | double precision c,c2,c3,dl1,el1,f,g,h,p,r,s,s2,tst1,tst2,pythag | ^ note: ‘c3’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepth3D.f -o RegresDepth3D.o RegresDepth3D.f:160:4: 160 | 200 END | 1 Warning: Label 200 at (1) defined but not used [-Wunused-label] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepth4D.f -o RegresDepth4D.o RegresDepth4D.f:169:4: 169 | 200 END | 1 Warning: Label 200 at (1) defined but not used [-Wunused-label] RegresDepth4D.f:281:53: 281 | SUBROUTINE RDEPTH41B(T,N,X1,X2,X3,XN1,XN2,XN3,Y,ALPHA,RESID,JRES, | 1 Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument] RegresDepth4D.f:215:43: 215 | SUBROUTINE STANDRDEPTH41(N,X,XN,EPS,J) | 1 Warning: Unused dummy argument ‘j’ at (1) [-Wunused-dummy-argument] LinAlg.f:609:72: 609 | LDEL=LDEL+JDM | ^ Warning: ‘ldel’ may be used uninitialized [-Wmaybe-uninitialized] LinAlg.f:600:10: 600 | LDEL=JNCB | ^ note: ‘ldel’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepthDeepest.f -o RegresDepthDeepest.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepthNd.f -o RegresDepthNd.o f951: Warning: Nonconforming tab character in column 1 of line 36 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 113 [-Wtabs] RegresDepthNd.f:172:4: 172 | 300 END | 1 Warning: Label 300 at (1) defined but not used [-Wunused-label] RegresDepthNd.f:372:11: 372 | I=N*RAN(1)+1.D0 | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] RegresDepthNd.f:377:11: 377 | L=N*RAN(1)+1. | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] RegresDepthNd.f:578:46: 578 | DOUBLE PRECISION X(MAXN,MAXP1),R(NNP1),S | 1 Warning: Unused variable ‘s’ declared at (1) [-Wunused-variable] RegresDepthNd.f:349:41: 349 | SUBROUTINE DEP_RDEPTH_APPR(N,NP,NP1,NDIR,MAXN,MAXP1, | 1 Warning: Unused dummy argument ‘np1’ at (1) [-Wunused-dummy-argument] clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c auxyl.cpp -o auxyl.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c dirOutl.cpp -o dirOutl.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c dirOutl_aux.cpp -o dirOutl_aux.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c hdepthND.cpp -o hdepthND.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c mc.cpp -o mc.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c medcouple.cpp -o medcouple.o mc.cpp:50:21: warning: variable 'wright' set but not used [-Wunused-but-set-variable] int64_t wleft,wmid,wright,w_tot=0,wrest=0; ^ 1 warning generated. clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c mrfDepth_init.c -o mrfDepth_init.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c randy.cpp -o randy.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o mrfDepth.so AdjOutlyingness.o Auxiliary.o Bagplot.o HalfSpaceDepth2D.o HalfSpaceDepthContour2D.o HalfSpaceDepthDeepestLoc.o HalfSpaceDepthMedian.o HalfSpaceDepthND.o HalfspaceDepth3D.o LinAlg.o Outlyingness.o Random.o RegresDepth3D.o RegresDepth4D.o RegresDepthDeepest.o RegresDepthNd.o auxyl.o dirOutl.o dirOutl_aux.o hdepthND.o mc.o medcouple.o mrfDepth_init.o randy.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/mrfDepth.Rcheck/00LOCK-mrfDepth/00new/mrfDepth/libs ** generating debug symbols (dSYM) ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mrfDepth)