* installing *source* package ‘epiworldR’ ... ** package ‘epiworldR’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++ -arch x86_64 -std=gnu++17 accepts -g... yes checking for clang++ -arch x86_64 -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... clang++ -arch x86_64 -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether clang++ -arch x86_64 -std=gnu++17 accepts -g... (cached) yes checking for clang++ -arch x86_64 -std=gnu++17 option to enable C++11 features... (cached) none needed checking whether we have a suitable tempdir... /var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T checking whether R CMD SHLIB can already compile programs using OpenMP... yes checking whether to build the dev version... configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/epiworldR-package.R ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c actions.cpp -o actions.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c agents.cpp -o agents.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c cpp11.cpp -o cpp11.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c db.cpp -o db.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c epimodels.cpp -o epimodels.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c model.cpp -o model.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c tool.cpp -o tool.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/cpp11/include' -I/opt/R/x86_64/include -I../inst/include/ -Dprintf_epiworld=Rprintf -fPIC -falign-functions=64 -Wall -g -O2 -c virus.cpp -o virus.o In file included from virus.cpp:4: In file included from ./epiworld-common.h:4: In file included from ../inst/include/epiworld/epiworld.hpp:54: ../inst/include/epiworld/virus-meat.hpp:59:47: warning: lambda capture 'logit' is not used [-Wunused-lambda-capture] VirusFun fun_infect = [coefs_f,vars,logit]( ^ virus.cpp:108:11: note: in instantiation of function template specialization 'epiworld::virus_fun_logit' requested here virus_fun_logit( ^ 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o epiworldR.so actions.o agents.o cpp11.o db.o epimodels.o model.o tool.o virus.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/epiworldR.Rcheck/00LOCK-epiworldR/00new/epiworldR/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (epiworldR)