* installing *source* package ‘GpGp’ ...
** package ‘GpGp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c matrix_mult.cpp -o matrix_mult.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c vecchia_loglik_grad_info.cpp -o vecchia_loglik_grad_info.o
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:10:
./covmatrix_funs_02.h:721:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( 7 );
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:11:
./covmatrix_funs_03.h:95:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( dim + 2 );
           ^
./covmatrix_funs_03.h:229:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( dim + 1 );
           ^
./covmatrix_funs_03.h:337:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( 4 );
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:17:
./covmatrix_funs_09.h:89:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( dim + 1 );
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:18:
./covmatrix_funs_10.h:187:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( dim + 1 );
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:19:
./covmatrix_funs_11.h:206:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( dim + 1 );
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:20:
./covmatrix_funs_12.h:209:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( dim + 1 );
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
In file included from ./onepass.h:8:
In file included from ./covmatrix_funs.h:21:
./covmatrix_funs_13.h:126:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms( 0 )*covparms( 4 );
           ^
./covmatrix_funs_13.h:127:9: warning: unused variable 'categ' [-Wunused-variable]
        double categ = covparms(0)*covparms(3);
               ^
./covmatrix_funs_13.h:542:12: warning: unused variable 'nugget' [-Wunused-variable]
    double nugget = covparms(0)*covparms(8);
           ^
In file included from vecchia_loglik_grad_info.cpp:8:
./onepass.h:93:10: warning: variable 'pd' set but not used [-Wunused-but-set-variable]
    bool pd = true;
         ^
./onepass.h:700:9: warning: unused variable 'dim' [-Wunused-variable]
    int dim = locs.ncol();
        ^
13 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o GpGp.so RcppExports.o matrix_mult.o vecchia_loglik_grad_info.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/GpGp.Rcheck/00LOCK-GpGp/00new/GpGp/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GpGp)