- using R version 4.4.0 (2024-04-24)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (Debian 13.2.0-24) 13.2.0
GNU Fortran (Debian 13.2.0-24) 13.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘superb/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘superb’ version ‘0.95.9’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘superb’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking whether startup messages can be suppressed ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [19s/23s] OK
- checking Rd files ... [4s/5s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [35s/41s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
showSignificance 5.093 0.067 6.835
superbPlot.boxplot 4.376 0.067 5.384
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [52s/60s] ERROR
Running ‘testthat.R’ [52s/60s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("superb")
Loading required package: superb
==> THIS IS A TEST OF runDebug <==
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 189 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_GRD.R:796:5'): figure 2: ───────────────────────────────────────
Error in `hist.default(as.numeric(x), breaks = breaks, plot = FALSE, include.lowest = include.lowest,
right = right)`: some 'x' not counted; maybe 'breaks' do not span range of 'x'
Backtrace:
▆
1. ├─lattice::histogram(...) at test_GRD.R:796:5
2. └─lattice:::histogram.formula(...)
3. └─lattice:::limits.and.aspect(...)
4. ├─base::do.call(prepanel.default.function, pargs)
5. └─lattice (local) `<fn>`(...)
6. └─lattice:::hist.constructor(x, breaks = breaks, ...)
7. ├─graphics::hist(...)
8. └─graphics::hist.default(...)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 189 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [187s/247s] OK
- checking PDF version of manual ... [7s/9s] OK
- checking HTML version of manual ... [3s/4s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR