- using R version 4.4.0 (2024-04-24)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (Debian 13.2.0-24) 13.2.0
GNU Fortran (Debian 13.2.0-24) 13.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘stratamatch/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘stratamatch’ version ‘0.1.9’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘stratamatch’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s/3s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the package can be unloaded cleanly ... [2s/3s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/3s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [14s/17s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [7s/9s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [14s/16s] ERROR
Running ‘testthat.R’ [13s/15s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(stratamatch)
>
> test_check("stratamatch")
[ FAIL 3 | WARN 11 | SKIP 0 | PASS 281 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-auto_stratify.R:326:3'): auto_stratify with prognostic formula + pilot_fraction works ──
sort(unique(a.strat$analysis_set$stratum)) not equal to 1:4.
Lengths differ: 2 is not 4
── Failure ('test-auto_stratify.R:338:3'): auto_stratify with prognostic formula + pilot_fraction works ──
dim(x) not equal to c(n_strat, 6).
1/2 mismatches
[1] 2 - 4 == -2
Backtrace:
▆
1. └─stratamatch (local) expect_issue_table_ok(...) at test-auto_stratify.R:338:3
2. └─testthat::expect_equal(dim(x), c(n_strat, 6)) at test-auto_stratify.R:13:3
── Failure ('test-auto_stratify.R:339:3'): auto_stratify with prognostic formula + pilot_fraction works ──
dim(x) not equal to c(n_strat, 3).
1/2 mismatches
[1] 2 - 4 == -2
Backtrace:
▆
1. └─stratamatch (local) expect_strata_table_ok(...) at test-auto_stratify.R:339:3
2. └─testthat::expect_equal(dim(x), c(n_strat, 3)) at test-auto_stratify.R:36:3
[ FAIL 3 | WARN 11 | SKIP 0 | PASS 281 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [46s/54s] OK
- checking PDF version of manual ... [7s/8s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR