* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’
* installing *source* package ‘SurvivalClusteringTree’ ...
** package ‘SurvivalClusteringTree’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-24) 13.2.0’
make[1]: Entering directory '/tmp/RtmpPHIXGW/R.INSTALL137f052cc587af/SurvivalClusteringTree/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c find_best_split_cox_bone.cpp -o find_best_split_cox_bone.o
find_best_split_cox_bone.cpp: In function ‘Rcpp::List find_best_split_cox_bone(arma::vec, arma::uvec, arma::mat, arma::mat, arma::vec, double, int)’:
find_best_split_cox_bone.cpp:65:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
   65 |   for(jj=0;jj<ndim_numeric;jj++){
      |            ~~^~~~~~~~~~~~~
find_best_split_cox_bone.cpp:132:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  132 |   for(jj=0;jj<ndim_factor;jj++){
      |            ~~^~~~~~~~~~~~
find_best_split_cox_bone.cpp:159:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  159 |         for(kk=0;kk<factor_left.n_elem;kk++){
      |                  ~~^~~~~~~~~~~~~~~~~~~
find_best_split_cox_bone.cpp:217:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  217 |   }else if(best_jj<ndim_numeric){
      |            ~~~~~~~^~~~~~~~~~~~~
find_best_split_cox_bone.cpp:239:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  239 |     for(ii=0;ii<nind;ii++){
      |              ~~^~~~~
find_best_split_cox_bone.cpp:241:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  241 |       for(kk=0;kk<best_split_factor_left.n_elem;kk++){
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
find_best_split_cox_bone.cpp:264:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  264 |   for(jj=0;jj<ndim_numeric+ndim_factor;jj++){
      |            ~~^~~~~~~~~~~~~~~~~~~~~~~~~
find_best_split_cox_bone.cpp:56:42: warning: unused variable ‘denominator’ [-Wunused-variable]
   56 |   double expected_zscore,variance_zscore,denominator,numerator,fraction;
      |                                          ^~~~~~~~~~~
find_best_split_cox_bone.cpp:56:54: warning: unused variable ‘numerator’ [-Wunused-variable]
   56 |   double expected_zscore,variance_zscore,denominator,numerator,fraction;
      |                                                      ^~~~~~~~~
find_best_split_cox_bone.cpp:56:64: warning: unused variable ‘fraction’ [-Wunused-variable]
   56 |   double expected_zscore,variance_zscore,denominator,numerator,fraction;
      |                                                                ^~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c find_best_split_cox_bone_old.cpp -o find_best_split_cox_bone_old.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o SurvivalClusteringTree.so RcppExports.o find_best_split_cox_bone.o find_best_split_cox_bone_old.o -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpPHIXGW/R.INSTALL137f052cc587af/SurvivalClusteringTree/src'
make[1]: Entering directory '/tmp/RtmpPHIXGW/R.INSTALL137f052cc587af/SurvivalClusteringTree/src'
make[1]: Leaving directory '/tmp/RtmpPHIXGW/R.INSTALL137f052cc587af/SurvivalClusteringTree/src'
installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-SurvivalClusteringTree/00new/SurvivalClusteringTree/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘SurvivalClusteringTree’ as ‘SurvivalClusteringTree_1.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (SurvivalClusteringTree)