* using log directory ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MiscMetabar.Rcheck’
* using R version 4.4.0 (2024-04-24)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-13 (Debian 13.2.0-24) 13.2.0
    GNU Fortran (Debian 13.2.0-24) 13.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘MiscMetabar/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MiscMetabar’ version ‘0.9.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MiscMetabar’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-release-linux-x86_64/MiscMetabar-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [19s/23s] OK
* checking whether the package can be loaded with stated dependencies ... [18s/22s] OK
* checking whether the package can be unloaded cleanly ... [18s/26s] OK
* checking whether the namespace can be loaded with stated dependencies ... [18s/24s] OK
* checking whether the namespace can be unloaded cleanly ... [19s/26s] OK
* checking loading without being on the library search path ... [19s/27s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [101s/120s] OK
* checking Rd files ... [2s/2s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [11s/12s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [123s/147s] OK
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
SRS_curve_pq            11.691  0.352  14.700
ggscatt_pq               7.291  0.039   9.001
subset_taxa_tax_control  6.544  0.189   7.846
LCBD_pq                  6.385  0.346   8.044
filter_trim              5.903  0.142   7.844
sankey_pq                5.326  0.030   5.853
psmelt_samples_pq        4.457  0.036   6.091
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [142s/102s] OK
  Running ‘testthat.R’ [142s/101s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [29s/35s] OK
* checking PDF version of manual ... [13s/17s] OK
* checking HTML version of manual ... [8s/13s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: OK