* using log directory ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/AIUQ.Rcheck’ * using R version 4.4.0 (2024-04-24) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (Debian 13.2.0-24) 13.2.0 GNU Fortran (Debian 13.2.0-24) 13.2.0 * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘AIUQ/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘AIUQ’ version ‘0.5.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘AIUQ’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-release-linux-x86_64/AIUQ-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/1s] OK * checking whether the package can be unloaded cleanly ... [0s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK * checking whether the namespace can be unloaded cleanly ... [0s/1s] OK * checking loading without being on the library search path ... [0s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [32s/41s] OK * checking Rd files ... [1s/2s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [116s/133s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed get_isf 12.697 0.442 13.835 get_dqt 12.761 0.353 14.531 SAM 12.002 0.796 15.620 modeled_isf 11.765 0.373 13.777 show.sam 11.570 0.416 14.644 modeled_dqt 11.427 0.440 13.308 aniso_SAM 10.334 0.345 11.606 plot_MSD 8.245 0.452 10.583 aniso_simulation 5.591 0.469 7.090 show.aniso_sam 5.669 0.120 6.531 simulation 4.749 0.310 5.657 * checking PDF version of manual ... [8s/11s] OK * checking HTML version of manual ... [4s/6s] OK * checking for non-standard things in the check directory ... OK * DONE Status: OK