- using R version 3.0.1 (2013-05-16)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘tsDyn/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘tsDyn’ version ‘0.9-2’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘tsDyn’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... WARNING
checkRd: (3) lstar.Rd:8-11: \synopsis will be removed in R 3.1.0
checkRd: (3) setar.Rd:9-11: \synopsis will be removed in R 3.1.0
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... [35s/35s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [54s/54s] OK
Running ‘00SetarAndFriends.R’ [5s/5s]
Comparing ‘00SetarAndFriends.Rout’ to ‘00SetarAndFriends.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running ‘TVECM.sim.R’ [3s/3s]
Comparing ‘TVECM.sim.Rout’ to ‘TVECM.sim.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running ‘TVECM_HSTEST.R’ [5s/5s]
Comparing ‘TVECM_HSTEST.Rout’ to ‘TVECM_HSTEST.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running ‘VAR.R’ [4s/4s]
Comparing ‘VAR.Rout’ to ‘VAR.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
76,77c83,84
< Equation cpiUSA -0.497252953 0.109356758 0.54022104 0.0237898927 -0.075679565
< Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459469 -0.170361820
---
> Equation cpiUSA -0.497252953 0.109356758 0.54022105 0.0237898927 -0.075679565
> Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459470 -0.170361820
85c92
< Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541665 -0.148246352
---
> Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541664 -0.148246352
88c95
< Equation cpiUSA 0.296441336 0.0006902825 0.6393083 1.471260343 -0.02924296
---
> Equation cpiUSA 0.296441336 0.0006902825 0.6393083 1.471260344 -0.02924296
93c100
< Equation cpiCAN -0.6292711 -0.279172353 0.195060204 0.45779914 0.0037287342
---
> Equation cpiCAN -0.6292711 -0.279172353 0.195060203 0.45779914 0.0037287342
221,222c228,229
< Equation cpiUSA -0.497252953 0.109356758 0.54022104 0.0237898927 -0.075679565
< Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459469 -0.170361820
---
> Equation cpiUSA -0.497252953 0.109356758 0.54022105 0.0237898927 -0.075679565
> Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459470 -0.170361820
232c239
< Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541665 -0.148246352
---
> Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541664 -0.148246352
237c244
< Equation cpiUSA 0.296441336 0.0006902825 0.6393083 1.471260343 -0.02924296
---
> Equation cpiUSA 0.296441336 0.0006902825 0.6393083 1.471260344 -0.02924296
242c249
< Equation cpiCAN -0.6292711 -0.279172353 0.195060204 0.45779914 0.0037287342
---
> Equation cpiCAN -0.6292711 -0.279172353 0.195060203 0.45779914 0.0037287342
719,720c726,727
< [1,] 8.589723e-05 -0.09997021 -0.02038428
< [2,] -4.837982e-03 -0.05650369 -0.08080706
---
> [1,] 8.589724e-05 -0.09997021 -0.02038427
> [2,] -4.837982e-03 -0.05650368 -0.08080706
725c732
< [1,] -8.628393e-05 -0.08995471 -0.04365856
---
> [1,] -8.628397e-05 -0.08995471 -0.04365856
727c734
< [3,] -4.894064e-03 -0.03650256 -0.08032416
---
> [3,] -4.894064e-03 -0.03650256 -0.08032415
731,733c738,740
< [1,] -0.0002766288 -0.09831076 -0.03323767
< [2,] -0.0049510847 -0.05598596 -0.08481712
< [3,] -0.0051883571 -0.04942190 -0.06421235
---
> [1,] -0.0002766288 -0.09831076 -0.03323768
> [2,] -0.0049510848 -0.05598596 -0.08481713
> [3,] -0.0051883571 -0.04942190 -0.06421236
737,739c744,746
< [1,] 0.001981517 -0.07953230 -0.007350034
< [2,] -0.002985054 -0.03652607 -0.068066371
< [3,] -0.003198583 -0.02795677 -0.050553199
---
> [1,] 0.001981517 -0.07953230 -0.007350036
> [2,] -0.002985055 -0.03652607 -0.068066373
> [3,] -0.003198583 -0.02795678 -0.050553202
Running ‘VECM.R’ [7s/7s]
Comparing ‘VECM.Rout’ to ‘VECM.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
1685c1692
< cpiUSA 0.0210190590 -2.123157e-03 0.47585012 1.498619849 -0.047398845
---
> cpiUSA 0.0210190589 -2.123157e-03 0.47585012 1.498619849 -0.047398845
Running ‘compare_tsDyn_vars.R’ [6s/6s]
Comparing ‘compare_tsDyn_vars.Rout’ to ‘compare_tsDyn_vars.Rout.save’ ...5a6,12
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
10c17
< The following object is masked from 'package:base':
---
> The following object(s) are masked from 'package:base':
69c76
< [2] "TRUE"
---
> [2] "Mean relative difference: 1.830196e-08"
73c80
< [6] "Mean relative difference: 2.148931e-08"
---
> [6] "Mean relative difference: 1.551162e-08"
79,80c86,87
< [5] "Mean relative difference: 0.0001434475"
< [6] "Mean relative difference: 0.001799349"
---
> [5] "Mean relative difference: 0.0001434445"
> [6] "Mean relative difference: 0.001799332"
94,95c101,102
< [5] "Mean relative difference: 2.555259e-08"
< [6] "TRUE"
---
> [5] "Mean relative difference: 2.719027e-08"
> [6] "Mean relative difference: 1.916757e-08"
119,122c126,129
< [1] "Component 1: Mean relative difference: 4.087909e-05"
< [2] "Component 2: Mean relative difference: 0.0001349057"
< [3] "Component 3: Mean relative difference: 0.000333499"
< [4] "Component 4: Mean relative difference: 0.007030098"
---
> [1] "Component 1: Mean relative difference: 4.087915e-05"
> [2] "Component 2: Mean relative difference: 0.0001349058"
> [3] "Component 3: Mean relative difference: 0.0003334996"
> [4] "Component 4: Mean relative difference: 0.007030107"
125,127c132,134
< [1] "Component 1: Mean relative difference: 5.373398e-05"
< [2] "Component 2: Mean relative difference: 0.0002085819"
< [3] "Component 3: Mean relative difference: 0.001637226"
---
> [1] "Component 1: Mean relative difference: 5.3734e-05"
> [2] "Component 2: Mean relative difference: 0.000208582"
> [3] "Component 3: Mean relative difference: 0.001637227"
200c207
< [4] "Mean relative difference: 0.0001395309"
---
> [4] "Mean relative difference: 0.0001395301"
203c210
< [2] "Mean relative difference: 6.786064e-07"
---
> [2] "Mean relative difference: 6.786063e-07"
205c212
< [4] "Mean relative difference: 1.354603e-07"
---
> [4] "Mean relative difference: 1.354595e-07"
209,210c216,217
< [3] "Mean relative difference: 2.451831e-08"
< [4] "Mean relative difference: 0.01644699"
---
> [3] "TRUE"
> [4] "Mean relative difference: 0.01644698"
214c221
< [3] "Mean relative difference: 2.451831e-08"
---
> [3] "TRUE"
218c225
< [2] "Mean relative difference: 1.26139e-05"
---
> [2] "Mean relative difference: 1.261389e-05"
220c227
< [4] "Mean relative difference: 2.108826e-05"
---
> [4] "Mean relative difference: 2.108834e-05"
226c233
< [4,] "Component 4: Mean relative difference: 0.03155347"
---
> [4,] "Component 4: Mean relative difference: 0.03155348"
233c240
< [1,] "Component 1: Mean relative difference: 0.09141031"
---
> [1,] "Component 1: Mean relative difference: 0.09141032"
235c242
< [3,] "Component 3: Mean relative difference: 0.09141032"
---
> [3,] "Component 3: Mean relative difference: 0.09141031"
238c245
< [1,] "Component 1: Mean relative difference: 0.09141318"
---
> [1,] "Component 1: Mean relative difference: 0.09141319"
Running ‘lstar.R’ [11s/11s]
Comparing ‘lstar.Rout’ to ‘lstar.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
63c70
< const1 0.489101 0.204915 2.3868 0.0169935 *
---
> const1 0.489101 0.204914 2.3869 0.0169929 *
66,70c73,77
< const2 -1.024076 2.430098 -0.4214 0.6734532
< phi2.1 0.423267 0.172146 2.4588 0.0139417 *
< phi2.2 -0.254609 0.585422 -0.4349 0.6636244
< gamma 11.153834 10.004786 1.1148 0.2649148
< th 3.339199 0.092749 36.0024 < 2.2e-16 ***
---
> const2 -1.024076 2.430067 -0.4214 0.6734493
> phi2.1 0.423267 0.172146 2.4588 0.0139415 *
> phi2.2 -0.254609 0.585416 -0.4349 0.6636208
> gamma 11.153834 10.004737 1.1149 0.2649124
> th 3.339199 0.092748 36.0030 < 2.2e-16 ***
145,150c152,157
< const1 0.288460 0.246037 1.1724 0.2410
< phi1.1 0.928029 0.094170 9.8549 <2e-16 ***
< const2 -0.672632 1.336363 -0.5033 0.6147
< phi2.1 0.133119 0.384826 0.3459 0.7294
< gamma 100.003135 93.728975 1.0669 0.2860
< th 3.235652 0.021024 153.9038 <2e-16 ***
---
> const1 0.288460 0.246039 1.1724 0.2410
> phi1.1 0.928029 0.094171 9.8547 <2e-16 ***
> const2 -0.672632 1.336549 -0.5033 0.6148
> phi2.1 0.133119 0.384879 0.3459 0.7294
> gamma 100.003135 93.792934 1.0662 0.2863
> th 3.235652 0.021034 153.8282 <2e-16 ***
224,229c231,236
< phi1.1 1.40051 0.17405 8.0465 8.882e-16 ***
< phi1.2 -0.22537 0.21245 -1.0608 0.288778
< phi2.1 0.76605 0.31698 2.4167 0.015661 *
< phi2.2 -1.05528 0.38300 -2.7553 0.005863 **
< gamma 2.45691 1.31198 1.8727 0.061114 .
< th 2.70784 0.15801 17.1375 < 2.2e-16 ***
---
> phi1.1 1.40051 0.17418 8.0406 8.882e-16 ***
> phi1.2 -0.22537 0.21261 -1.0600 0.289142
> phi2.1 0.76605 0.31715 2.4154 0.015717 *
> phi2.2 -1.05528 0.38318 -2.7540 0.005887 **
> gamma 2.45691 1.30651 1.8805 0.060039 .
> th 2.70784 0.15844 17.0908 < 2.2e-16 ***
303,310c310,317
< trend1 1.8252e-05 1.6342e-03 0.0112 0.991089
< phi1.1 1.4037e+00 1.6546e-01 8.4833 < 2.2e-16 ***
< phi1.2 -2.3333e-01 2.1022e-01 -1.1099 0.267047
< trend2 6.9321e-04 2.3867e-03 0.2904 0.771473
< phi2.1 7.3901e-01 2.9735e-01 2.4853 0.012945 *
< phi2.2 -1.0305e+00 3.5984e-01 -2.8639 0.004185 **
< gamma 2.5757e+00 1.3490e+00 1.9094 0.056213 .
< th 2.6980e+00 1.6637e-01 16.2169 < 2.2e-16 ***
---
> trend1 1.8252e-05 1.6344e-03 0.0112 0.991090
> phi1.1 1.4037e+00 1.6554e-01 8.4793 < 2.2e-16 ***
> phi1.2 -2.3333e-01 2.1044e-01 -1.1087 0.267542
> trend2 6.9321e-04 2.3867e-03 0.2904 0.771476
> phi2.1 7.3901e-01 2.9754e-01 2.4837 0.013002 *
> phi2.2 -1.0305e+00 3.6030e-01 -2.8602 0.004234 **
> gamma 2.5757e+00 1.3529e+00 1.9038 0.056942 .
> th 2.6980e+00 1.6629e-01 16.2246 < 2.2e-16 ***
386,395c393,402
< const1 3.8694e-01 3.1768e-01 1.2180 0.2232142
< trend1 2.5958e-04 1.3092e-03 0.1983 0.8428239
< phi1.1 1.2410e+00 1.5052e-01 8.2444 2.220e-16 ***
< phi1.2 -3.2770e-01 9.8629e-02 -3.3226 0.0008919 ***
< const2 7.9812e-01 3.7117e-01 2.1503 0.0315332 *
< trend2 1.9957e-04 1.4824e-03 0.1346 0.8929096
< phi2.1 3.0345e-01 1.7018e-01 1.7831 0.0745682 .
< phi2.2 -6.3465e-01 1.2179e-01 -5.2110 1.879e-07 ***
< gamma 1.0000e+02 8.0618e+01 1.2404 0.2148216
< th 2.5681e+00 1.4783e-02 173.7186 < 2.2e-16 ***
---
> const1 3.8694e-01 3.1768e-01 1.2180 0.223218
> trend1 2.5958e-04 1.3092e-03 0.1983 0.842824
> phi1.1 1.2410e+00 1.5053e-01 8.2443 2.220e-16 ***
> phi1.2 -3.2770e-01 9.8630e-02 -3.3226 0.000892 ***
> const2 7.9812e-01 3.7117e-01 2.1503 0.031534 *
> trend2 1.9957e-04 1.4824e-03 0.1346 0.892910
> phi2.1 3.0345e-01 1.7018e-01 1.7831 0.074570 .
> phi2.2 -6.3465e-01 1.2179e-01 -5.2109 1.879e-07 ***
> gamma 1.0000e+02 8.0617e+01 1.2404 0.214813
> th 2.5681e+00 1.4783e-02 173.7213 < 2.2e-16 ***
469c476
< const1 0.399240 0.283236 1.4096 0.1586673
---
> const1 0.399240 0.283183 1.4098 0.1585895
471,476c478,483
< phi1.2 -0.331696 0.097462 -3.4033 0.0006657 ***
< const2 0.782130 0.346259 2.2588 0.0238956 *
< phi2.1 0.300946 0.165911 1.8139 0.0696928 .
< phi2.2 -0.624613 0.119007 -5.2485 1.533e-07 ***
< gamma 871.923077 3818.880366 0.2283 0.8193982
< th 2.560332 0.010230 250.2826 < 2.2e-16 ***
---
> phi1.2 -0.331696 0.097428 -3.4045 0.0006628 ***
> const2 0.782130 0.346191 2.2592 0.0238681 *
> phi2.1 0.300946 0.165911 1.8139 0.0696923 .
> phi2.2 -0.624613 0.118978 -5.2498 1.523e-07 ***
> gamma 871.923077 3673.244309 0.2374 0.8123687
> th 2.560332 0.010033 255.1886 < 2.2e-16 ***
Running ‘nlar-methods.R’ [5s/5s]
Comparing ‘nlar-methods.Rout’ to ‘nlar-methods.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running ‘regime.R’ [4s/4s]
Running ‘toMlm.R’ [3s/3s]
Comparing ‘toMlm.Rout’ to ‘toMlm.Rout.save’ ...4a5,11
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [16s/16s] OK
- checking re-building of vignette PDFs ... [18s/20s] OK
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
See
‘/home/hornik/tmp/R.check/r-release/Work/PKGS/tsDyn.Rcheck/00check.log’
for details.