Check results for 'rrcov'

using R version 3.0.0 (2013-04-03)
using platform: i686-pc-linux-gnu (32-bit)
using session charset: UTF-8
checking for file ‘rrcov/DESCRIPTION’ ... OK
this is package ‘rrcov’ version ‘1.3-3’
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘rrcov’ can be installed ... OK
checking installed package size ... OK
checking package directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking loading without being on the library search path ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... OK
checking Rd files ... OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... OK
checking data for ASCII and uncompressed saves ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking line endings in Makefiles ... OK
checking for portable compilation flags in Makevars ... OK
checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
checking compiled code ... OK
checking sizes of PDF files under ‘inst/doc’ ... OK
checking installed files from ‘inst/doc’ ... OK
checking examples ... [14s/14s] OK
checking for unstated dependencies in tests ... OK
checking tests ... [38s/39s] OK
Running ‘thubert.R’ [3s/3s]
Comparing ‘thubert.Rout’ to ‘thubert.Rout.save’ ...443,462c443,462
< 1 -0.0045773 0.0549267 -0.02698656
< 2 0.0965384 0.0109426 -0.02063108
< 3 0.0416353 0.0107242 -0.02541740
< 4 -0.1234169 0.0056391 0.03062310
< 5 0.0010063 -0.0179974 0.02308289
< 6 -0.1235640 0.0274857 0.02424650
< 7 -0.0388886 0.0428451 0.12122500
< 8 -0.1548665 0.0178563 0.01746690
< 9 0.0150163 0.0165039 0.11600674
< 10 0.1733165 -0.0603964 0.02890552
< 11 0.1029635 0.0728556 -0.00056662
< 12 0.1377507 0.1076671 0.00724301
< 13 0.1382985 -0.0258913 0.06404825
< 14 0.0252256 -0.0062022 -0.02752700
< 15 -0.0143890 -0.0300723 -0.00142708
< 16 -0.0265579 -0.0672450 -0.03909250
< 17 0.0402824 -0.0920752 -0.03365219
< 18 -0.0931485 -0.0481563 0.03960396
< 19 -0.1563735 0.0321830 0.01398074
< 20 -0.0601237 0.0077557 -0.07390044
---
> 1 -0.0045773 0.0549267 0.02698656
> 2 0.0965384 0.0109426 0.02063108
> 3 0.0416353 0.0107242 0.02541740
> 4 -0.1234169 0.0056391 -0.03062310
> 5 0.0010063 -0.0179974 -0.02308289
> 6 -0.1235640 0.0274857 -0.02424650
> 7 -0.0388886 0.0428451 -0.12122500
> 8 -0.1548665 0.0178563 -0.01746690
> 9 0.0150163 0.0165039 -0.11600674
> 10 0.1733165 -0.0603964 -0.02890552
> 11 0.1029635 0.0728556 0.00056662
> 12 0.1377507 0.1076671 -0.00724301
> 13 0.1382985 -0.0258913 -0.06404825
> 14 0.0252256 -0.0062022 0.02752700
> 15 -0.0143890 -0.0300723 0.00142708
> 16 -0.0265579 -0.0672450 0.03909250
> 17 0.0402824 -0.0920752 0.03365219
> 18 -0.0931485 -0.0481563 -0.03960396
> 19 -0.1563735 0.0321830 -0.01398074
> 20 -0.0601237 0.0077557 0.07390044
1002,1021c1002,1021
< 1 -0.0045773 0.0549267 -0.02698656
< 2 0.0965384 0.0109426 -0.02063108
< 3 0.0416353 0.0107242 -0.02541740
< 4 -0.1234169 0.0056391 0.03062310
< 5 0.0010063 -0.0179974 0.02308289
< 6 -0.1235640 0.0274857 0.02424650
< 7 -0.0388886 0.0428451 0.12122500
< 8 -0.1548665 0.0178563 0.01746690
< 9 0.0150163 0.0165039 0.11600674
< 10 0.1733165 -0.0603964 0.02890552
< 11 0.1029635 0.0728556 -0.00056662
< 12 0.1377507 0.1076671 0.00724301
< 13 0.1382985 -0.0258913 0.06404825
< 14 0.0252256 -0.0062022 -0.02752700
< 15 -0.0143890 -0.0300723 -0.00142708
< 16 -0.0265579 -0.0672450 -0.03909250
< 17 0.0402824 -0.0920752 -0.03365219
< 18 -0.0931485 -0.0481563 0.03960396
< 19 -0.1563735 0.0321830 0.01398074
< 20 -0.0601237 0.0077557 -0.07390044
---
> 1 -0.0045773 0.0549267 0.02698656
> 2 0.0965384 0.0109426 0.02063108
> 3 0.0416353 0.0107242 0.02541740
> 4 -0.1234169 0.0056391 -0.03062310
> 5 0.0010063 -0.0179974 -0.02308289
> 6 -0.1235640 0.0274857 -0.02424650
> 7 -0.0388886 0.0428451 -0.12122500
> 8 -0.1548665 0.0178563 -0.01746690
> 9 0.0150163 0.0165039 -0.11600674
> 10 0.1733165 -0.0603964 -0.02890552
> 11 0.1029635 0.0728556 0.00056662
> 12 0.1377507 0.1076671 -0.00724301
> 13 0.1382985 -0.0258913 -0.06404825
> 14 0.0252256 -0.0062022 0.02752700
> 15 -0.0143890 -0.0300723 0.00142708
> 16 -0.0265579 -0.0672450 0.03909250
> 17 0.0402824 -0.0920752 0.03365219
> 18 -0.0931485 -0.0481563 -0.03960396
> 19 -0.1563735 0.0321830 -0.01398074
> 20 -0.0601237 0.0077557 0.07390044
1032,1106c1032,1106
< 1 31.105415 -4.714217 10.4566165
< 2 31.707650 -5.748724 10.7682402
< 3 33.366131 -4.625897 12.1570167
< 4 34.173377 -6.069657 12.4466895
< 5 33.780418 -5.508823 11.9872893
< 6 32.493478 -4.684595 10.5679819
< 7 32.592637 -5.235522 10.3765493
< 8 31.293363 -4.865797 10.9379676
< 9 33.160964 -5.714260 12.3098920
< 10 31.919786 -5.384537 12.3374332
< 11 38.231962 -6.810641 13.5994385
< 12 39.290479 -5.393906 15.2942554
< 13 39.418445 -7.326461 11.5194898
< 14 43.906584 -13.214819 8.3282743
< 15 1.906326 0.716061 -0.8635112
< 16 0.263255 0.926016 -1.9009292
< 17 -1.776489 -1.072332 -0.5496140
< 18 0.464648 0.702441 0.0482897
< 19 0.267826 -1.283779 -0.2925812
< 20 2.122108 0.165970 -0.8924686
< 21 0.937217 0.548532 -0.4132196
< 22 0.423273 -1.781869 -0.0323061
< 23 0.047532 0.018909 -1.1259327
< 24 -0.490041 -0.520202 -1.1065753
< 25 -2.143049 0.720869 -0.0495474
< 26 1.094748 -1.459175 0.2226246
< 27 2.070705 0.898573 0.0023229
< 28 -0.294998 0.830258 0.5929001
< 29 -1.242995 0.300216 -0.2010507
< 30 0.147958 0.439099 2.0003038
< 31 0.170818 1.440946 -0.9755627
< 32 -0.958531 -1.199730 -1.0129867
< 33 0.697307 -0.874343 -0.7260649
< 34 -2.278946 0.261106 0.4196544
< 35 1.962829 0.809318 0.2033113
< 36 0.626631 -0.600666 0.8004036
< 37 0.550885 -1.881448 0.7382776
< 38 -1.249717 0.336214 -0.9349845
< 39 -1.106696 1.569418 0.1869576
< 40 -0.684034 -0.939963 -0.1034965
< 41 1.559314 1.551408 0.3660323
< 42 -0.538741 -0.447358 1.6361099
< 43 -0.252685 -2.080564 -0.7765259
< 44 0.217012 1.027281 1.7015154
< 45 -1.497600 1.349234 -0.2698932
< 46 0.100388 1.026443 1.5390401
< 47 -0.811117 2.195271 -0.5208141
< 48 1.462210 1.321318 0.5600144
< 49 1.383976 0.740714 -0.7348906
< 50 1.636773 -0.215464 0.3195369
< 51 -0.530918 0.759743 -1.2069247
< 52 -0.109566 2.107455 -0.5315473
< 53 -0.564334 -0.060847 2.3910630
< 54 -0.272234 -1.122711 -1.5060028
< 55 -0.608660 -1.197219 -0.5255609
< 56 0.565430 -0.710345 -1.3708230
< 57 -1.115629 0.888816 -0.4186014
< 58 1.351288 -0.374815 -1.1980618
< 59 0.998016 -0.151228 0.9007970
< 60 0.124017 -0.764846 1.9005963
< 61 1.189858 -1.905264 0.7721322
< 62 -2.190589 0.579614 -0.1377914
< 63 -0.518278 -0.931130 -1.4534768
< 64 2.124566 0.194391 -0.0327092
< 65 0.154218 1.050861 1.1309885
< 66 -1.197852 -1.044147 -0.2265269
< 67 -0.114174 -0.094763 -0.5168926
< 68 -2.201115 0.032271 0.8573493
< 69 -1.307843 1.104815 -0.7741270
< 70 0.691449 -0.676665 1.0004603
< 71 1.150975 0.050861 -0.0717068
< 72 -0.457293 -0.861871 0.1026350
< 73 -0.392258 -0.897451 0.9178065
< 74 -0.584658 -1.450471 0.3201857
< 75 -0.972517 -0.063777 1.8223995
---
> 1 31.105415 -4.714217 -10.4566165
> 2 31.707650 -5.748724 -10.7682402
> 3 33.366131 -4.625897 -12.1570167
> 4 34.173377 -6.069657 -12.4466895
> 5 33.780418 -5.508823 -11.9872893
> 6 32.493478 -4.684595 -10.5679819
> 7 32.592637 -5.235522 -10.3765493
> 8 31.293363 -4.865797 -10.9379676
> 9 33.160964 -5.714260 -12.3098920
> 10 31.919786 -5.384537 -12.3374332
> 11 38.231962 -6.810641 -13.5994385
> 12 39.290479 -5.393906 -15.2942554
> 13 39.418445 -7.326461 -11.5194898
> 14 43.906584 -13.214819 -8.3282743
> 15 1.906326 0.716061 0.8635112
> 16 0.263255 0.926016 1.9009292
> 17 -1.776489 -1.072332 0.5496140
> 18 0.464648 0.702441 -0.0482897
> 19 0.267826 -1.283779 0.2925812
> 20 2.122108 0.165970 0.8924686
> 21 0.937217 0.548532 0.4132196
> 22 0.423273 -1.781869 0.0323061
> 23 0.047532 0.018909 1.1259327
> 24 -0.490041 -0.520202 1.1065753
> 25 -2.143049 0.720869 0.0495474
> 26 1.094748 -1.459175 -0.2226246
> 27 2.070705 0.898573 -0.0023229
> 28 -0.294998 0.830258 -0.5929001
> 29 -1.242995 0.300216 0.2010507
> 30 0.147958 0.439099 -2.0003038
> 31 0.170818 1.440946 0.9755627
> 32 -0.958531 -1.199730 1.0129867
> 33 0.697307 -0.874343 0.7260649
> 34 -2.278946 0.261106 -0.4196544
> 35 1.962829 0.809318 -0.2033113
> 36 0.626631 -0.600666 -0.8004036
> 37 0.550885 -1.881448 -0.7382776
> 38 -1.249717 0.336214 0.9349845
> 39 -1.106696 1.569418 -0.1869576
> 40 -0.684034 -0.939963 0.1034965
> 41 1.559314 1.551408 -0.3660323
> 42 -0.538741 -0.447358 -1.6361099
> 43 -0.252685 -2.080564 0.7765259
> 44 0.217012 1.027281 -1.7015154
> 45 -1.497600 1.349234 0.2698932
> 46 0.100388 1.026443 -1.5390401
> 47 -0.811117 2.195271 0.5208141
> 48 1.462210 1.321318 -0.5600144
> 49 1.383976 0.740714 0.7348906
> 50 1.636773 -0.215464 -0.3195369
> 51 -0.530918 0.759743 1.2069247
> 52 -0.109566 2.107455 0.5315473
> 53 -0.564334 -0.060847 -2.3910630
> 54 -0.272234 -1.122711 1.5060028
> 55 -0.608660 -1.197219 0.5255609
> 56 0.565430 -0.710345 1.3708230
> 57 -1.115629 0.888816 0.4186014
> 58 1.351288 -0.374815 1.1980618
> 59 0.998016 -0.151228 -0.9007970
> 60 0.124017 -0.764846 -1.9005963
> 61 1.189858 -1.905264 -0.7721322
> 62 -2.190589 0.579614 0.1377914
> 63 -0.518278 -0.931130 1.4534768
> 64 2.124566 0.194391 0.0327092
> 65 0.154218 1.050861 -1.1309885
> 66 -1.197852 -1.044147 0.2265269
> 67 -0.114174 -0.094763 0.5168926
> 68 -2.201115 0.032271 -0.8573493
> 69 -1.307843 1.104815 0.7741270
> 70 0.691449 -0.676665 -1.0004603
> 71 1.150975 0.050861 0.0717068
> 72 -0.457293 -0.861871 -0.1026350
> 73 -0.392258 -0.897451 -0.9178065
> 74 -0.584658 -1.450471 -0.3201857
> 75 -0.972517 -0.063777 -1.8223995
1210c1210
< bushfire 38 5 1 38435.075910 NA
---
> bushfire 38 5 1 37423.626544 NA
1256c1256
< [1] 196.05
---
> [1] 193.45
Running ‘tlda.R’ [3s/3s]
Comparing ‘tlda.Rout’ to ‘tlda.Rout.save’ ... OK
Running ‘tldapp.R’ [16s/16s]
Comparing ‘tldapp.Rout’ to ‘tldapp.Rout.save’ ... OK
Running ‘tmcd4.R’ [1s/1s]
Comparing ‘tmcd4.Rout’ to ‘tmcd4.Rout.save’ ... OK
Running ‘tmest.R’ [1s/1s]
Comparing ‘tmest.Rout’ to ‘tmest.Rout.save’ ... OK
Running ‘tmest4.R’ [1s/1s]
Comparing ‘tmest4.Rout’ to ‘tmest4.Rout.save’ ... OK
Running ‘tmve4.R’ [1s/1s]
Comparing ‘tmve4.Rout’ to ‘tmve4.Rout.save’ ... OK
Running ‘togk4.R’ [1s/1s]
Comparing ‘togk4.Rout’ to ‘togk4.Rout.save’ ... OK
Running ‘tqda.R’ [1s/2s]
Comparing ‘tqda.Rout’ to ‘tqda.Rout.save’ ... OK
Running ‘tsde.R’ [1s/1s]
Comparing ‘tsde.Rout’ to ‘tsde.Rout.save’ ... OK
Running ‘tsest.R’ [8s/8s]
Comparing ‘tsest.Rout’ to ‘tsest.Rout.save’ ... OK
checking for unstated dependencies in vignettes ... OK
checking package vignettes in ‘inst/doc’ ... OK
checking running R code from vignettes ... [4s/4s] OK
checking re-building of vignette PDFs ... [5s/5s] OK
checking PDF version of manual ... OK