• using R version 2.15.0 (2012-03-30)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘polydect/DESCRIPTION’ ... OK
• this is package ‘polydect’ version ‘0.1-2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘polydect’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [21s/21s] OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [24s/24s] OK
  Running ‘test.HD.R’ [0s/0s]
  Comparing ‘test.HD.Rout’ to ‘test.HD.Rout.save’ ... OK
  Running ‘test.bds.R’ [20s/20s]
  Comparing ‘test.bds.Rout’ to ‘test.bds.Rout.save’ ... OK
  Running ‘test.poly.R’ [0s/0s]
  Comparing ‘test.poly.Rout’ to ‘test.poly.Rout.save’ ... OK
  Running ‘test.sig.R’ [0s/0s]
  Comparing ‘test.sig.Rout’ to ‘test.sig.Rout.save’ ... OK
  Running ‘test0.R’ [0s/0s]
  Comparing ‘test0.Rout’ to ‘test0.Rout.save’ ... OK
  Running ‘test1.R’ [0s/0s]
  Comparing ‘test1.Rout’ to ‘test1.Rout.save’ ... OK
  Running ‘test2.R’ [0s/1s]
  Comparing ‘test2.Rout’ to ‘test2.Rout.save’ ... OK
  Running ‘test3.R’ [1s/1s]
  Comparing ‘test3.Rout’ to ‘test3.Rout.save’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [21s/21s] OK
• checking re-building of vignette PDFs ... [22s/22s] OK
• checking PDF version of manual ... OK