• using R version 2.15.0 (2012-03-30)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘multcomp/DESCRIPTION’ ... OK
• this is package ‘multcomp’ version ‘1.2-12’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Package suggested but not available for checking: ‘coxme’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘multcomp’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [17s/17s] OK
• checking differences from ‘multcomp-Ex.Rout’ to ‘multcomp-Ex.Rout.save’ ...
  274,275c274,293
  < Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
  < there is no package called 'coxme'
  ---
  >
  > Attaching package: 'bdsmatrix'
  >
  > The following object(s) are masked from 'package:base':
  >
  > backsolve
  >
  >
  > Attaching package: 'Matrix'
  >
  > The following object(s) are masked from 'package:base':
  >
  > det
  >
  > Warning: replacing previous import 'diag' when loading 'Matrix'
  > Warning in Ops.factor(1, center) : | not meaningful for factors
  > Warning in Ops.factor(1, center) : | not meaningful for factors
  > Estimate lwr upr
  > trt2 - trt1 1.551055 1.184063 Inf
  > trt3 - trt1 1.396362 1.068776 Inf
  279a298,301
  >
  > detaching 'package:coxme', 'package:Matrix', 'package:lattice',
  > 'package:nlme', 'package:bdsmatrix'
  >
  1223a1246,1252
  >
  > Attaching package: 'Matrix'
  >
  > The following object(s) are masked from 'package:base':
  >
  > det
  >
  OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [7s/7s] OK
  Running ‘bugfix.R’ [2s/2s]
  Comparing ‘bugfix.Rout’ to ‘bugfix.Rout.save’ ... OK
  Running ‘regtest-Tukey.R’ [1s/1s]
  Comparing ‘regtest-Tukey.Rout’ to ‘regtest-Tukey.Rout.save’ ... OK
  Running ‘regtest-anova.R’ [1s/1s]
  Comparing ‘regtest-anova.Rout’ to ‘regtest-anova.Rout.save’ ... OK
  Running ‘regtest-interface.R’ [1s/1s]
  Comparing ‘regtest-interface.Rout’ to ‘regtest-interface.Rout.save’ ... OK
  Running ‘regtest-lme.R’ [3s/3s]
  Comparing ‘regtest-lme.Rout’ to ‘regtest-lme.Rout.save’ ...11a12,18
  > Attaching package: 'Matrix'
  >
  > The following object(s) are masked from 'package:base':
  >
  > det
  >
  >
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [36s/57s] OK
• checking re-building of vignette PDFs ... [41s/64s] OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/home/hornik/tmp/R.check/r-release/Work/PKGS/multcomp.Rcheck/00check.log’
  for details.