- using R version 2.15.0 (2012-03-30)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘mprobit/DESCRIPTION’ ... OK
- this is package ‘mprobit’ version ‘0.9-3’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking whether package ‘mprobit’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
mprobit.formula: warning in match.call(expand = FALSE): partial
argument match of 'expand' to 'expand.dots'
mprobit.formula: no visible binding for global variable ‘response’
ordprobit.formula: warning in match.call(expand = FALSE): partial
argument match of 'expand' to 'expand.dots'
ordprobit.formula: no visible binding for global variable ‘response’
- checking Rd files ... NOTE
prepare_Rd: exchmvn.Rd:52-53: Dropping empty section \seealso
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... NOTE
File ‘/home/hornik/tmp/R.check/r-release/Work/build/Packages/mprobit/libs/mprobit.so’:
Found ‘printf’, possibly from ‘printf’ (C)
Objects: ‘mprobit.ar.o’, ‘mprobit.exch.o’, ‘mprobit.unstr.o’,
‘mvnsub.o’, ‘ordprobit.ar.o’, ‘ordprobit.exch.o’,
‘ordprobit.unstr.o’, ‘qnmin.o’
Found ‘putchar’, possibly from ‘putchar’ (C)
Objects: ‘mprobit.ar.o’, ‘mprobit.exch.o’, ‘mprobit.unstr.o’,
‘ordprobit.ar.o’, ‘ordprobit.exch.o’, ‘ordprobit.unstr.o’,
‘qnmin.o’
Found ‘puts’, possibly from ‘printf’ (C), ‘puts’ (C)
Objects: ‘mprobit.ar.o’, ‘mprobit.exch.o’, ‘mprobit.unstr.o’,
‘ordprobit.ar.o’, ‘ordprobit.exch.o’, ‘ordprobit.unstr.o’,
‘qnmin.o’
Compiled code should not call functions which might terminate R nor
write to stdout/stderr instead of to the console.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
- checking examples ... [41s/41s] OK
- checking for unstated dependencies in tests ... WARNING
‘library’ or ‘require’ call not declared from: ‘MASS’
- checking tests ... [107s/107s] OK
Running ‘bintest.R’ [28s/28s]
Running ‘exchmvn.test.R’ [0s/0s]
Running ‘mvnder.test.R’ [1s/1s]
Running ‘ordtest.R’ [46s/46s]
Running ‘ordtest2.R’ [31s/31s]
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 3 notes.
See
‘/home/hornik/tmp/R.check/r-release/Work/PKGS/mprobit.Rcheck/00check.log’
for details.