• using R version 2.15.0 (2012-03-30)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘iRefR/DESCRIPTION’ ... OK
• this is package ‘iRefR’ version ‘0.94’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘iRefR’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... ERROR
  Running examples in ‘iRefR-Ex.R’ failed
  The error most likely occurred in:
  
  > ### Name: select_protein
  > ### Title: Get all iRefIndex records for a given Protein
  > ### Aliases: select_protein
  >
  > ### ** Examples
  >
  > ## get tables
  > irefindex_80_mouse = get_irefindex("10090", "8.0", tempdir())
  Downloading iRefIndex file...
  trying URL 'ftp://ftp.no.embnet.org/irefindex/data/archive/release_8.0/psimi_tab/MITAB2.6/10090.mitab.01192011.txt.zip'
  Warning in download.file(url, destfile = zipfile) :
  failed to create a data connection
  Error in download.file(url, destfile = zipfile) :
  cannot open URL 'ftp://ftp.no.embnet.org/irefindex/data/archive/release_8.0/psimi_tab/MITAB2.6/10090.mitab.01192011.txt.zip'
  Calls: get_irefindex -> download.file
  Execution halted