• using R version 3.0.1 (2013-05-16)
  • using platform: i686-pc-linux-gnu (32-bit)
  • using session charset: UTF-8
  • checking for file ‘evtree/DESCRIPTION’ ... OK
  • this is package ‘evtree’ version ‘0.1-2’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘evtree’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... [29s/29s] OK
  • checking differences from ‘evtree-Ex.Rout’ to ‘evtree-Ex.Rout.save’ ...
    3c3
    < > base::assign(".oldSearch", base::search(), pos = 'CheckExEnv')
    ---
    > > assign(".oldSearch", search(), pos = 'CheckExEnv')
    26,27d25
    < Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
    < there is no package called 'Formula'
    73c71
    < detaching 'package:rpart'
    ---
    > detaching 'package:Formula', 'package:rpart'
    318,329c316,329
    < | [2] thal in normal, fixed defect
    < | | [3] maximum_heart_rate < 162
    < | | | [4] sex in female
    < | | | | [5] resting_blood_pressure < 136: absence (n = 22, err = 0.0%)
    < | | | | [6] resting_blood_pressure >= 136
    < | | | | | [7] chest_pain_type in atypical angina, asymptomatic: presence (n = 41, err = 14.6%)
    < | | | | | [8] chest_pain_type in typical angina, non-anginal pain: absence (n = 8, err = 0.0%)
    < | | | [9] sex in male: presence (n = 170, err = 14.7%)
    < | | [10] maximum_heart_rate >= 162
    < | | | [11] age < 61: absence (n = 64, err = 7.8%)
    < | | | [12] age >= 61: presence (n = 25, err = 20.0%)
    < | [13] thal in reversible defect: presence (n = 420, err = 6.0%)
    ---
    > | [2] thal in fixed defect, reversible defect: presence (n = 466, err = 6.7%)
    > | [3] thal in normal
    > | | [4] chest_pain_type in typical angina, asymptomatic
    > | | | [5] major_vessels < 1
    > | | | | [6] resting_blood_pressure < 155
    > | | | | | [7] age < 61: absence (n = 23, err = 0.0%)
    > | | | | | [8] age >= 61: presence (n = 21, err = 28.6%)
    > | | | | [9] resting_blood_pressure >= 155: presence (n = 21, err = 4.8%)
    > | | | [10] major_vessels >= 1: presence (n = 102, err = 6.9%)
    > | | [11] chest_pain_type in atypical angina, non-anginal pain
    > | | | [12] oldpeak < 1.8
    > | | | | [13] major_vessels < 2: absence (n = 84, err = 11.9%)
    > | | | | [14] major_vessels >= 2: presence (n = 14, err = 28.6%)
    > | | | [15] oldpeak >= 1.8: presence (n = 19, err = 21.1%)
    331,332c331,332
    < Number of inner nodes: 6
    < Number of terminal nodes: 7
    ---
    > Number of inner nodes: 7
    > Number of terminal nodes: 8
    336,337c336,337
    < absence 89 1
    < presence 61 119
    ---
    > absence 97 2
    > presence 53 118
    385,390c385,390
    < | [2] Petal.Length < 5
    < | | [3] Petal.Width < 1.7
    < | | | [4] Petal.Width < 1: setosa (n = 50, err = 0.0%)
    < | | | [5] Petal.Width >= 1: versicolor (n = 47, err = 0.0%)
    < | | [6] Petal.Width >= 1.7: virginica (n = 7, err = 14.3%)
    < | [7] Petal.Length >= 5: virginica (n = 46, err = 4.3%)
    ---
    > | [2] Petal.Length < 3: setosa (n = 50, err = 0.0%)
    > | [3] Petal.Length >= 3
    > | | [4] Petal.Length < 5
    > | | | [5] Petal.Width < 1.7: versicolor (n = 47, err = 0.0%)
    > | | | [6] Petal.Width >= 1.7: virginica (n = 7, err = 14.3%)
    > | | [7] Petal.Length >= 5: virginica (n = 46, err = 4.3%)
    OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [20s/20s] OK
  • checking re-building of vignette PDFs ... [26s/27s] OK
  • checking PDF version of manual ... OK