• using R version 2.8.1 (2008-12-22)
  • using session charset: UTF-8
  • checking for file 'eiPack/DESCRIPTION' ... OK
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  • this is package 'eiPack' version '0.1-2'
  • checking package name space information ... OK
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  • checking package dependencies ... OK
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  • checking if this is a source package ... OK
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  • checking whether package 'eiPack' can be installed ... WARNING
    Found the following significant warnings:
    WARNING: found \itemize inside \value in file 'bounds.Rd'
    WARNING: found \itemize inside \value in file 'ei.reg.Rd'
    WARNING: found \itemize inside \value in file 'ei.reg.bayes.Rd'
    WARNING: found \itemize inside \value in file 'lambda.reg.Rd'
    See http://www.r-project.org/nosvn/R.check/r-release-linux-ix86/eiPack-00install.html for details.
  • checking package directory ... OK
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  • checking for portable file names ... OK
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  • checking for sufficient/correct file permissions ... OK
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  • checking DESCRIPTION meta-information ... OK
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  • checking top-level files ... OK
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  • checking index information ... OK
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  • checking package subdirectories ... OK
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  • checking R files for non-ASCII characters ... OK
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  • checking R files for syntax errors ... OK
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  • checking whether the package can be loaded ... OK
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  • checking whether the package can be loaded with stated dependencies ... OK
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  • checking whether the name space can be loaded with stated dependencies ... OK
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  • checking for unstated dependencies in R code ... OK
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  • checking S3 generic/method consistency ... OK
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  • checking replacement functions ... OK
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  • checking foreign function calls ... OK
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  • checking R code for possible problems ... NOTE
    lambda.MD: no visible global function definition for ‘dims’
    plotMD: no visible global function definition for ‘plot.eiMDcoverage’
    plotMD: no visible global function definition for ‘plot.eiMDdensity’
    read.betas: no visible global function definition for ‘%w/o%’
  • checking Rd files ... OK
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  • checking Rd cross-references ... OK
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  • checking for missing documentation entries ... OK
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  • checking for code/documentation mismatches ... OK
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  • checking Rd \usage sections ... OK
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  • checking data for non-ASCII characters ... OK
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  • checking line endings in C/C++/Fortran sources/headers ... OK
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  • checking line endings in Makefiles ... OK
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  • checking for portable use of $BLAS_LIBS ... OK
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  • creating eiPack-Ex.R ... OK
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  • checking examples ... OK
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  • creating eiPack-manual.tex ... OK
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  • checking eiPack-manual.tex using pdflatex ... OK
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