• using R version 3.0.1 (2013-05-16)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘dcemriS4/DESCRIPTION’ ... OK
• this is package ‘dcemriS4’ version ‘0.48’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘dcemriS4’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [329s/329s] OK
• checking differences from ‘dcemriS4-Ex.Rout’ to ‘dcemriS4-Ex.Rout.save’ ...
  3c3
  < oro.nifti: Rigorous - NIfTI+ANALYZE+AFNI Input / Output (version = 0.3.9)
  ---
  > oro.nifti: Rigorous - NIfTI+ANALYZE+AFNI Input / Output (version = 0.3.8)
  9c9
  < > base::assign(".oldSearch", base::search(), pos = 'CheckExEnv')
  ---
  > > assign(".oldSearch", search(), pos = 'CheckExEnv')
  32c32
  < 37.148460 3.895062 1.516158 -0.010660
  ---
  > 37.14845917 3.89506144 1.51615753 -0.01066018
  49c49
  < [8,] 0.65000000 2.8732966 3.326186
  ---
  > [8,] 0.65000000 2.8732966 3.326187
  149,161c149,161
  < [1,] 0.145599052 0.4064038 0.4936260
  < [2,] 0.218344559 0.7242723 0.4976282
  < [3,] 0.250521815 0.6195951 0.4584990
  < [4,] 0.268391926 0.4949085 0.4819061
  < [5,] 0.279725126 0.9046522 0.4778145
  < [6,] 0.009912791 0.2763975 0.1291656
  < [7,] 0.146992146 0.5568548 0.4684067
  < [8,] 0.328712966 1.0103584 0.4896956
  < [9,] 0.387767110 0.7383558 0.4861585
  < [10,] 0.250521815 0.6097328 0.5219730
  < [11,] 0.250521815 0.5703365 0.4586507
  < [12,] 0.250521815 0.5411518 0.4760144
  < [13,] 0.250521815 0.5462441 0.5194304
  ---
  > [1,] 0.145599052 0.3810125 0.55292642
  > [2,] 0.218344559 0.5962536 0.50322417
  > [3,] 0.250521815 0.6975559 0.48797216
  > [4,] 0.268391926 0.7516978 0.48087096
  > [5,] 0.279725126 0.7905062 0.47505964
  > [6,] 0.009912791 0.4574822 0.08727356
  > [7,] 0.146992146 0.4597193 0.47426411
  > [8,] 0.328712966 0.8578130 0.49763244
  > [9,] 0.387767110 0.9703206 0.50389926
  > [10,] 0.250521815 0.5507150 0.45706188
  > [11,] 0.250521815 0.6216169 0.47242806
  > [12,] 0.250521815 0.7714078 0.50453120
  > [13,] 0.250521815 0.8395316 0.52522990
  252c252
  < [13,] 0.250521815 0.8430926 0.8430926 0.8434068 0.8433965
  ---
  > [13,] 0.250521815 0.8430926 0.8430925 0.8434068 0.8433965
  356c356
  < [1] 1.522074
  ---
  > [1] 1.522075
  359c359
  < [1] -0.009832209
  ---
  > [1] -0.00983213
  381,393c381,393
  < [1,] 0.145599052 0.1678452 0.16592766 0.55254849
  < [2,] 0.218344559 0.2658134 0.24219283 0.50264588
  < [3,] 0.250521815 0.3129245 0.27084876 0.48798627
  < [4,] 0.268391926 0.3403433 0.28533489 0.48014076
  < [5,] 0.279725126 0.3582433 0.29400920 0.47516094
  < [6,] 0.009912791 0.7331255 0.01475737 0.09028427
  < [7,] 0.146992146 0.2043296 0.15691602 0.47338401
  < [8,] 0.328712966 0.3961533 0.36284044 0.49722427
  < [9,] 0.387767110 0.4608153 0.43840558 0.50468090
  < [10,] 0.250521815 0.2491542 0.24915417 0.45785051
  < [11,] 0.250521815 0.2801023 0.25820501 0.47252745
  < [12,] 0.250521815 0.3476498 0.28871475 0.50510375
  < [13,] 0.250521815 0.3833826 0.31198210 0.52406079
  ---
  > [1,] 0.145599052 0.1678452 0.16592766 0.55254848
  > [2,] 0.218344559 0.2658134 0.24219283 0.50264587
  > [3,] 0.250521815 0.3129245 0.27084876 0.48798626
  > [4,] 0.268391926 0.3403433 0.28533489 0.48014075
  > [5,] 0.279725126 0.3582433 0.29400920 0.47516093
  > [6,] 0.009912791 0.7331255 0.01475737 0.09028433
  > [7,] 0.146992146 0.2043296 0.15691602 0.47338402
  > [8,] 0.328712966 0.3961533 0.36284044 0.49722426
  > [9,] 0.387767110 0.4608153 0.43840557 0.50468088
  > [10,] 0.250521815 0.2491542 0.24915417 0.45785050
  > [11,] 0.250521815 0.2801023 0.25820501 0.47252744
  > [12,] 0.250521815 0.3476498 0.28871475 0.50510374
  > [13,] 0.250521815 0.3833826 0.31198211 0.52406078
  405,407c405,407
  < [1,] 0.0600 1.840405e-03 1.371417e-03
  < [2,] 0.0600 1.754635e-02 1.710091e-02
  < [3,] 0.0600 2.818906e-02 2.771863e-02
  ---
  > [1,] 0.0600 1.840405e-03 1.371419e-03
  > [2,] 0.0600 1.754635e-02 1.710092e-02
  > [3,] 0.0600 2.818906e-02 2.771864e-02
  411,412c411,412
  < [7,] 0.0600 3.971422e-02 3.895468e-02
  < [8,] 0.0600 1.899215e-02 1.873550e-02
  ---
  > [7,] 0.0600 3.971422e-02 3.895469e-02
  > [8,] 0.0600 1.899215e-02 1.873551e-02
  414c414
  < [10,] 0.0001 1.128820e-17 3.025133e-18
  ---
  > [10,] 0.0001 1.128817e-17 3.025355e-18
  417c417
  < [13,] 0.1200 4.396547e-02 4.480785e-02
  ---
  > [13,] 0.1200 4.396546e-02 4.480785e-02
  542c542
  < 99.5197733 0.6534572
  ---
  > 99.5197735 0.6534572
  588,598c588,598
  < [1,] 1.650000 0.775142 0.7662219 0.7339893
  < [2,] 1.733333 0.778938 0.7701721 0.7395294
  < [3,] 1.816667 0.782176 0.7737276 0.7446729
  < [4,] 1.900000 0.784939 0.7769461 0.7494692
  < [5,] 1.983333 0.787302 0.7798738 0.7539578
  < [6,] 2.066667 0.789326 0.7825480 0.7581712
  < [7,] 2.150000 0.791067 0.7849987 0.7621355
  < [8,] 2.233333 0.792571 0.7872505 0.7658728
  < [9,] 2.316667 0.793878 0.7893233 0.7694010
  < [10,] 2.400000 0.795021 0.7912340 0.7727356
  < [11,] 2.483333 0.796029 0.7929963 0.7758895
  ---
  > [1,] 1.650000 0.775142 0.7662219 0.7671487
  > [2,] 1.733333 0.778938 0.7701721 0.7709909
  > [3,] 1.816667 0.782176 0.7737276 0.7744416
  > [4,] 1.900000 0.784939 0.7769461 0.7775586
  > [5,] 1.983333 0.787302 0.7798738 0.7803881
  > [6,] 2.066667 0.789326 0.7825480 0.7829671
  > [7,] 2.150000 0.791067 0.7849987 0.7853256
  > [8,] 2.233333 0.792571 0.7872505 0.7874881
  > [9,] 2.316667 0.793878 0.7893233 0.7894747
  > [10,] 2.400000 0.795021 0.7912340 0.7913018
  > [11,] 2.483333 0.796029 0.7929963 0.7929833
  OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [8s/8s] OK
• checking re-building of vignette PDFs ... [15s/16s] OK
• checking PDF version of manual ... OK