Check results for 'ResearchMethods'

using R version 2.14.1 (2011-12-22)
using platform: i686-pc-linux-gnu (32-bit)
using session charset: UTF-8
using option ‘--no-vignettes’
checking for file ‘ResearchMethods/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘ResearchMethods’ version ‘1.2’
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
checking for executable files ... OK
checking whether package ‘ResearchMethods’ can be installed ... OK
checking installed package size ... OK
checking package directory ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... NOTE
BlandAltman: warning in assign("bands", tclVar(bands), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman: warning in assign("bias", tclVar(bias), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman: warning in assign("region", tclVar(region), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman: warning in assign("biasVal", tclVar(biasVal), env =
BAenv): partial argument match of 'env' to 'envir'
BlandAltman: warning in assign("smooth", tclVar(smooth), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman : refresh: warning in evalq(tclvalue(bands), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman : refresh: warning in evalq(tclvalue(region), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman : refresh: warning in evalq(tclvalue(bias), env = BAenv):
partial argument match of 'env' to 'envir'
BlandAltman : refresh: warning in evalq(tclvalue(biasVal), env =
BAenv): partial argument match of 'env' to 'envir'
caseRatio: no visible binding for '<<-' assignment to ‘CRenv’
caseRatio: warning in assign("r", tclVar(0.5), env = CRenv): partial
argument match of 'env' to 'envir'
caseRatio: no visible binding for global variable ‘CRenv’
caseRatio: warning in assign("alpha", tclVar(alpha), env = CRenv):
partial argument match of 'env' to 'envir'
caseRatio: warning in assign("beta", tclVar(beta), env = CRenv):
partial argument match of 'env' to 'envir'
caseRatio : getA: no visible binding for global variable ‘CRenv’
caseRatio : getB: no visible binding for global variable ‘CRenv’
caseRatio : refresh: no visible binding for global variable ‘CRenv’
caseRatio: warning in assign("aEntry", aEntry, env = CRenv): partial
argument match of 'env' to 'envir'
caseRatio: warning in assign("bEntry", bEntry, env = CRenv): partial
argument match of 'env' to 'envir'
confInt: no visible binding for '<<-' assignment to ‘CIenv’
confInt: warning in assign("mean", tclVar(0), env = CIenv): partial
argument match of 'env' to 'envir'
confInt: no visible binding for global variable ‘CIenv’
confInt: warning in assign("sig", tclVar(1), env = CIenv): partial
argument match of 'env' to 'envir'
confInt: warning in assign("n", tclVar(25), env = CIenv): partial
argument match of 'env' to 'envir'
confInt: warning in assign("reps", tclVar(25), env = CIenv): partial
argument match of 'env' to 'envir'
confInt: warning in assign("alpha", tclVar(0.05), env = CIenv): partial
argument match of 'env' to 'envir'
confInt: warning in assign("upperTail", tclVar(1), env = CIenv):
partial argument match of 'env' to 'envir'
confInt: warning in assign("lowerTail", tclVar(1), env = CIenv):
partial argument match of 'env' to 'envir'
confInt: warning in assign("mat", mat, env = CIenv): partial argument
match of 'env' to 'envir'
confInt : resample: no visible binding for global variable ‘CIenv’
confInt : resample: warning in assign("mat", mat, env = CIenv): partial
argument match of 'env' to 'envir'
confInt : refresh: no visible binding for global variable ‘CIenv’
confInt: warning in assign("nEntry", nEntry, env = CIenv): partial
argument match of 'env' to 'envir'
confInt: warning in assign("repEntry", repEntry, env = CIenv): partial
argument match of 'env' to 'envir'
histSample: no visible binding for '<<-' assignment to ‘HSenv’
histSample: warning in assign("subset", tclVar(subset), env = HSenv):
partial argument match of 'env' to 'envir'
histSample: no visible binding for global variable ‘HSenv’
histSample : choose: no visible binding for global variable ‘HSenv’
histSample : choose: warning in assign("runDown", 0, env = HSenv):
partial argument match of 'env' to 'envir'
histSample : choose: warning in assign("dat", dat, env = HSenv):
partial argument match of 'env' to 'envir'
histSample : choose: warning in assign("lineData", lineData, env =
HSenv): partial argument match of 'env' to 'envir'
histSample : choose: warning in assign("linePoints", linePoints, env =
HSenv): partial argument match of 'env' to 'envir'
histSample : choose: warning in assign("yLim", yLim, env = HSenv):
partial argument match of 'env' to 'envir'
histSample : choose: warning in assign("splits", splits, env = HSenv):
partial argument match of 'env' to 'envir'
histSample : choose: warning in assign("title", title, env = HSenv):
partial argument match of 'env' to 'envir'
histSample : choose: warning in evalq(tkconfigure(sampleSize, variable
= subset), env = HSenv): partial argument match of 'env' to 'envir'
histSample : refresh: no visible binding for global variable ‘HSenv’
histSample: warning in assign("options", options, env = HSenv): partial
argument match of 'env' to 'envir'
histSample: warning in assign("names", names, env = HSenv): partial
argument match of 'env' to 'envir'
histSample: warning in assign("sampleSize", sampleSize, env = HSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: no visible binding for '<<-' assignment to ‘SSenv’
menuSampleSize: warning in assign("nCalc", tclVar(1), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: no visible binding for global variable ‘SSenv’
menuSampleSize: warning in assign("alpha", tclVar(0.05), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("beta", tclVar(0.1), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("mu0", tclVar(1), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("mu1", tclVar(5), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("sig0", tclVar(1), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("sig1", tclVar(1), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("Qe", tclVar(0.5), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("delta", tclVar(1), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("rho", tclVar(0), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("pi0", tclVar(0.25), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("pi1", tclVar(0.75), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("n", tclVar(1), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize: warning in assign("T", tclVar(100), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("mui", tclVar("10,20,30,40,50"), env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("type", 2, env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize: warning in assign("printResult", "Select a
Calculation", env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize: warning in assign("eqnNumber", "(!)", env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("plotType", 1, env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("mu0",
tclVar(as.numeric(tclvalue(tkget(mu0Entry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: no visible binding for global variable
‘SSenv’
menuSampleSize : getInput: warning in assign("mu1",
tclVar(as.numeric(tclvalue(tkget(mu1Entry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("sig0",
tclVar(as.numeric(tclvalue(tkget(sig0Entry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("sig1",
tclVar(as.numeric(tclvalue(tkget(sig1Entry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("delta",
tclVar(as.numeric(tclvalue(tkget(deltaEntry)))), env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("Qe",
tclVar(as.numeric(tclvalue(tkget(QeEntry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("rho",
tclVar(as.numeric(tclvalue(tkget(rhoEntry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("pi0",
tclVar(as.numeric(tclvalue(tkget(pi0Entry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("pi1",
tclVar(as.numeric(tclvalue(tkget(pi1Entry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("T",
tclVar(as.numeric(tclvalue(tkget(TEntry)))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : getInput: warning in assign("mui",
tclVar((tclvalue(tkget(muiEntry)))), env = SSenv): partial argument
match of 'env' to 'envir'
menuSampleSize : meanPoint: no visible binding for global variable
‘SSenv’
menuSampleSize : meanPoint: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPoint: warning in assign("type", 3, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : meanPoint: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPoint: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPoint: warning in assign("plotType", 1, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean1: no visible binding for global variable ‘SSenv’
menuSampleSize : mean1: warning in evalq(tkconfigure(betaSlider, var =
beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in evalq(tkconfigure(nSlider, var = n),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in assign("n", tclVar(ceiling(n)), env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in assign("type", 1, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in assign("plotType", 2, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : mean1: warning in assign("beta", tclVar(beta), env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: no visible binding for global variable
‘SSenv’
menuSampleSize : mean2Indep: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in evalq(tkconfigure(nSlider, var
= n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("mu1",
tclVar(as.numeric(tclvalue(SSenv$mu0)) +
as.numeric(tclvalue(SSenv$delta))), env = SSenv): partial argument
match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("sig1",
tclVar(as.numeric(tclvalue(SSenv$sig0))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("type", 1, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("printResult", out, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("plotType", 3, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : mean2Indep: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: no visible binding for global variable
‘SSenv’
menuSampleSize : meanPaired: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in evalq(tkconfigure(nSlider, var
= n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("mu1",
tclVar(as.numeric(tclvalue(SSenv$mu0)) +
as.numeric(tclvalue(SSenv$delta))), env = SSenv): partial argument
match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("sig1",
tclVar(as.numeric(tclvalue(SSenv$sig0))), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("type", 1, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("printResult", out, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("plotType", 4, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : meanPaired: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPoint: no visible binding for global variable
‘SSenv’
menuSampleSize : propPoint: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPoint: warning in assign("pi1", SSenv$pi0, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPoint: warning in assign("type", 2, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : propPoint: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPoint: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPoint: warning in assign("plotType", 5, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop1: no visible binding for global variable ‘SSenv’
menuSampleSize : prop1: warning in evalq(tkconfigure(betaSlider, var =
beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in evalq(tkconfigure(nSlider, var = n),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in assign("n", tclVar(ceiling(n)), env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in assign("type", 2, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in assign("plotType", 6, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : prop1: warning in assign("beta", tclVar(beta), env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: no visible binding for global variable
‘SSenv’
menuSampleSize : prop2Indep: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: warning in evalq(tkconfigure(nSlider, var
= n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: no visible global function definition for
‘bsamsize’
menuSampleSize : prop2Indep: warning in assign("n",
tclVar(ceiling(n[1]) + ceil(n[2])), env = SSenv): partial argument
match of 'env' to 'envir'
menuSampleSize : prop2Indep: no visible global function definition for
‘ceil’
menuSampleSize : prop2Indep: warning in assign("type", 2, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: warning in assign("printResult", out, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: warning in assign("plotType", 7, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : prop2Indep: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: no visible binding for global variable
‘SSenv’
menuSampleSize : propPaired: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in evalq(tkconfigure(nSlider, var
= n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in assign("type", 2, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in assign("printResult", out, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in assign("plotType", 8, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : propPaired: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: no visible binding for global variable
‘SSenv’
menuSampleSize : survScaled: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in evalq(tkconfigure(nSlider, var
= n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in assign("type", 6, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in assign("printResult", out, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in assign("plotType", 9, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survScaled: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: no visible binding for global variable
‘SSenv’
menuSampleSize : survRatio: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: warning in evalq(tkconfigure(nSlider, var =
n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: warning in assign("n", tclVar(ceiling(n)),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: warning in assign("type", 4, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : survRatio: warning in assign("plotType", 11, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups: no visible binding for global variable
‘SSenv’
menuSampleSize : surv2Groups: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups: warning in evalq(tkconfigure(nSlider, var
= n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups : psi: no visible binding for global
variable ‘SSenv’
menuSampleSize : surv2Groups: warning in assign("n",
tclVar(ceiling(n)), env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize : surv2Groups: warning in assign("type", 4, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups: warning in assign("printResult", out, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups: warning in assign("plotType", 10, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : surv2Groups: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : icc: no visible binding for global variable ‘SSenv’
menuSampleSize : icc: warning in assign("n", tclVar(ceiling(n)), env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : icc: warning in assign("type", 5, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : icc: warning in assign("eqnNumber", sub, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : icc: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : icc: warning in assign("plotType", 12, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : kappa: no visible binding for global variable ‘SSenv’
menuSampleSize : kappa: warning in evalq(tkconfigure(betaSlider, var =
beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in evalq(tkconfigure(nSlider, var = n),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("n", tclVar(ceiling(n)), env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("type", 7, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("eqnNumber", sub, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("printResult", out, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("plotType", 13, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("beta", tclVar(beta), env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : kappa: warning in assign("type", 5, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioPoint: no visible binding for global variable
‘SSenv’
menuSampleSize : oddsRatioPoint: warning in assign("n",
tclVar(ceiling(n)), env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize : oddsRatioPoint: warning in assign("type", 7, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioPoint: warning in assign("printResult", out,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioPoint: warning in assign("eqnNumber", sub,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioPoint: warning in assign("plotType", 14, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: no visible binding for global variable
‘SSenv’
menuSampleSize : oddsRatioHyp: warning in evalq(tkconfigure(betaSlider,
var = beta), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: warning in evalq(tkconfigure(nSlider,
var = n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: warning in assign("n",
tclVar(ceiling(n)), env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize : oddsRatioHyp: warning in assign("type", 7, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: warning in assign("eqnNumber", sub, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: warning in assign("printResult", out,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: warning in assign("plotType", 15, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : oddsRatioHyp: warning in assign("beta", tclVar(beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskPoint: no visible binding for global
variable ‘SSenv’
menuSampleSize : relativeRiskPoint: warning in assign("n",
tclVar(ceiling(n)), env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize : relativeRiskPoint: warning in assign("type", 7, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskPoint: warning in assign("printResult",
out, env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskPoint: warning in assign("eqnNumber", sub,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskPoint: warning in assign("plotType", 16,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: no visible binding for global
variable ‘SSenv’
menuSampleSize : relativeRiskHyp: warning in
evalq(tkconfigure(betaSlider, var = beta), env = SSenv): partial
argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: warning in evalq(tkconfigure(nSlider,
var = n), env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: warning in assign("n",
tclVar(ceiling(n)), env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize : relativeRiskHyp: warning in assign("type", 7, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: warning in assign("eqnNumber", sub,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: warning in assign("printResult", out,
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: warning in assign("plotType", 17, env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : relativeRiskHyp: warning in assign("beta",
tclVar(beta), env = SSenv): partial argument match of 'env' to
'envir'
menuSampleSize : refresh2: no visible binding for global variable
‘SSenv’
menuSampleSize: warning in assign("alphaSlider", alphaSlider, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("betaSlider", betaSlider, env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize: warning in assign("nSlider", nSlider, env = SSenv):
partial argument match of 'env' to 'envir'
menuSampleSize: warning in evalq(tkconfigure(alphaSlider, var = alpha),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize: no visible binding for global variable ‘alpha’
menuSampleSize: warning in evalq(tkconfigure(betaSlider, var = beta),
env = SSenv): partial argument match of 'env' to 'envir'
menuSampleSize: warning in evalq(tkconfigure(nSlider, var = n), env =
SSenv): partial argument match of 'env' to 'envir'
menuSampleSize: no visible binding for global variable ‘n’
menuSampleSize : <anonymous>: warning in assign("nCalc", tclVar(0), env
= SSenv): partial argument match of 'env' to 'envir'
menuSampleSize : <anonymous>: no visible binding for global variable
‘SSenv’
menuSampleSize : <anonymous>: warning in assign("nCalc", tclVar(1), env
= SSenv): partial argument match of 'env' to 'envir'
minimAllocGUI : allocate : add: warning in exists("patMat", env =
MAenv): partial argument match of 'env' to 'envir'
minimAllocGUI : allocate : add: warning in assign("patMat", patMat, env
= MAenv): partial argument match of 'env' to 'envir'
minimAllocGUI : allocate : add: warning in get(paste("var", i, sep =
""), env = MAenv): partial argument match of 'env' to 'envir'
minimAllocGUI : allocate: warning in assign(paste("var", i, sep = ""),
tclVar(0), env = MAenv): partial argument match of 'env' to 'envir'
minimAllocGUI : allocate: warning in get(paste("var", i, sep = ""), env
= MAenv): partial argument match of 'env' to 'envir'
minimAllocGUI : allocate: warning in assign(paste("radio", i, ".", j,
sep = ""), tempRadio, env = MAenv): partial argument match of 'env'
to 'envir'
multHypothesis: no visible binding for '<<-' assignment to ‘MHenv’
multHypothesis: warning in assign("alpha", tclVar(alpha), env = MHenv):
partial argument match of 'env' to 'envir'
multHypothesis: no visible binding for global variable ‘MHenv’
multHypothesis: warning in assign("cases", tclVar(hyp), env = MHenv):
partial argument match of 'env' to 'envir'
multHypothesis : getAlpha: no visible binding for global variable
‘MHenv’
multHypothesis : refresh: no visible binding for global variable
‘MHenv’
multHypothesis: warning in assign("alphaEntry", alphaEntry, env =
MHenv): partial argument match of 'env' to 'envir'
ratioCompare: warning in assign("p1Spot", tclVar(0.5), env = RCenv):
partial argument match of 'env' to 'envir'
ratioCompare: warning in assign("p2Spot", tclVar(0.5), env = RCenv):
partial argument match of 'env' to 'envir'
reactGame : refresh: no visible global function definition for ‘myAOV’
rhoRange: no visible binding for '<<-' assignment to ‘RRenv’
rhoRange: warning in assign("dat", dat, env = RRenv): partial argument
match of 'env' to 'envir'
rhoRange: no visible binding for global variable ‘RRenv’
rhoRange: warning in assign("xLim", range(dat[, 1]), env = RRenv):
partial argument match of 'env' to 'envir'
rhoRange: warning in assign("yLim", range(dat[, 2]), env = RRenv):
partial argument match of 'env' to 'envir'
rhoRange: warning in assign("minX", tclVar(xMin), env = RRenv): partial
argument match of 'env' to 'envir'
rhoRange: warning in assign("maxX", tclVar(xMax), env = RRenv): partial
argument match of 'env' to 'envir'
rhoRange: warning in assign("perc", tclVar(perc), env = RRenv): partial
argument match of 'env' to 'envir'
rhoRange : refresh: no visible binding for global variable ‘RRenv’
rhoRange : percent: no visible binding for global variable ‘RRenv’
rhoRange : percent: warning in assign("minX", tclVar(x[p1]), env =
RRenv): partial argument match of 'env' to 'envir'
rhoRange : percent: warning in assign("maxX", tclVar(x[p2]), env =
RRenv): partial argument match of 'env' to 'envir'
rhoRange : percent: warning in evalq(tkconfigure(xMinScale, variable =
minX), env = RRenv): partial argument match of 'env' to 'envir'
rhoRange : percent: no visible binding for global variable ‘minX’
rhoRange : percent: warning in evalq(tkconfigure(xMaxScale, variable =
maxX), env = RRenv): partial argument match of 'env' to 'envir'
rhoRange : percent: no visible binding for global variable ‘maxX’
rhoRange : move: no visible binding for global variable ‘RRenv’
rhoRange : move: no visible global function definition for ‘tclvale’
rhoRange : move: warning in assign("perc", tclVar(sum(p)/n), env =
RRenv): partial argument match of 'env' to 'envir'
rhoRange : move: warning in evalq(tkconfigure(percentScale, variable =
perc), env = RRenv): partial argument match of 'env' to 'envir'
rhoScale: no visible binding for '<<-' assignment to ‘RSenv’
rhoScale: warning in assign("scale", tclVar(scale), env = RSenv):
partial argument match of 'env' to 'envir'
rhoScale: no visible binding for global variable ‘RSenv’
rhoScale: warning in assign("shift", tclVar(shift), env = RSenv):
partial argument match of 'env' to 'envir'
rhoScale: warning in assign("x", x, env = RSenv): partial argument
match of 'env' to 'envir'
rhoScale: warning in assign("y", y, env = RSenv): partial argument
match of 'env' to 'envir'
rhoScale: warning in assign("xLab", xlab, env = RSenv): partial
argument match of 'env' to 'envir'
rhoScale: warning in assign("yLab", ylab, env = RSenv): partial
argument match of 'env' to 'envir'
rhoScale: warning in assign("limx", limx, env = RSenv): partial
argument match of 'env' to 'envir'
rhoScale: warning in assign("limy", limy, env = RSenv): partial
argument match of 'env' to 'envir'
rhoScale: warning in assign("rho", round(cor(x, y), 2), env = RSenv):
partial argument match of 'env' to 'envir'
rhoScale : refresh: warning in evalq(tclvalue(scale), env = RSenv):
partial argument match of 'env' to 'envir'
rhoScale : refresh: no visible binding for global variable ‘RSenv’
rhoScale : refresh: warning in evalq(tclvalue(shift), env = RSenv):
partial argument match of 'env' to 'envir'
rhoScale : refresh: warning in assign("X", X, env = RSenv): partial
argument match of 'env' to 'envir'
rhoScale : refresh: warning in assign("Y", Y, env = RSenv): partial
argument match of 'env' to 'envir'
rocCurve: no visible binding for '<<-' assignment to ‘RCenv’
rocCurve: warning in assign("split", tclVar(max(x, y)), env = RCenv):
partial argument match of 'env' to 'envir'
rocCurve: no visible binding for global variable ‘RCenv’
rocCurve: warning in assign("x", x, env = RCenv): partial argument
match of 'env' to 'envir'
rocCurve: warning in assign("y", y, env = RCenv): partial argument
match of 'env' to 'envir'
rocCurve: warning in assign("spec", vector(), env = RCenv): partial
argument match of 'env' to 'envir'
rocCurve: warning in assign("sens", vector(), env = RCenv): partial
argument match of 'env' to 'envir'
rocCurve: warning in assign("bestCut", max(x, y), env = RCenv): partial
argument match of 'env' to 'envir'
rocCurve: warning in assign("bestDist", Inf, env = RCenv): partial
argument match of 'env' to 'envir'
sampleAssign: no visible binding for '<<-' assignment to ‘SAenv’
sampleAssign: warning in assign("n", tclVar(n), env = SAenv): partial
argument match of 'env' to 'envir'
sampleAssign: no visible binding for global variable ‘SAenv’
sampleAssign: warning in assign("numTreat", tclVar(treat), env =
SAenv): partial argument match of 'env' to 'envir'
sampleAssign: warning in assign("allocType", type, env = SAenv):
partial argument match of 'env' to 'envir'
sampleAssign: warning in assign("title", "", env = SAenv): partial
argument match of 'env' to 'envir'
sampleAssign : refresh: no visible binding for global variable ‘SAenv’
sampleAssign : refresh: warning in assign("allocType", index, env =
SAenv): partial argument match of 'env' to 'envir'
sampleAssign : refresh: warning in assign("n", tclVar(n), env = SAenv):
partial argument match of 'env' to 'envir'
sampleAssign : refresh: warning in assign("numTreat", tclVar(num), env
= SAenv): partial argument match of 'env' to 'envir'
sampleAssign : refresh: warning in assign("title", "Simple
Randomization", env = SAenv): partial argument match of 'env' to
'envir'
sampleAssign : refresh: warning in assign("title", "Random Permuted
Blocks", env = SAenv): partial argument match of 'env' to 'envir'
sampleAssign : refresh: warning in assign("numTreat", tclVar(2), env =
SAenv): partial argument match of 'env' to 'envir'
sampleAssign : refresh: warning in assign("title", "Biased Coin", env =
SAenv): partial argument match of 'env' to 'envir'
sampleAssign : refresh: warning in assign("letters", assignList, env =
SAenv): partial argument match of 'env' to 'envir'
sampleSchemes: no visible binding for '<<-' assignment to ‘SCenv’
sampleSchemes: warning in assign("u1", rep(0, 36), env = SCenv):
partial argument match of 'env' to 'envir'
sampleSchemes: no visible binding for global variable ‘SCenv’
sampleSchemes: warning in assign("u2", rep(0, 36), env = SCenv):
partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("u3", rep(0, 36), env = SCenv):
partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("g1", rep(0, 40), env = SCenv):
partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("g2", rep(0, 40), env = SCenv):
partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("g3", rep(0, 40), env = SCenv):
partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("sampleType", sampleType, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("sampleName", "Simple Random
Sampling", env = SCenv): partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("clusterSize", clusterSize, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes: warning in assign("size", tclVar(sampleSize), env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("sampleType", type, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: no visible binding for global variable
‘SCenv’
sampleSchemes : getSample: warning in assign("sampleName", "Simple
Random Sampling", env = SCenv): partial argument match of 'env' to
'envir'
sampleSchemes : getSample: warning in assign("u1", colors[0:36], env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("u2", colors[37:72], env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("u3", colors[73:108], env
= SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("g1", colors[109:148], env
= SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("g2", colors[149:188], env
= SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("g3", colors[189:228], env
= SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("sampleName", "Stratified
Random Sampling (by dorm)", env = SCenv): partial argument match of
'env' to 'envir'
sampleSchemes : getSample: warning in assign("u1", colors, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("u2", colors, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("u3", colors, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("g1", colors, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("g2", colors, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("g3", colors, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("sampleName", "Stratified
Random Sampling (by student type)", env = SCenv): partial argument
match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("sampleName", "Cluster
Sample (by floor)", env = SCenv): partial argument match of 'env' to
'envir'
sampleSchemes : getSample: warning in assign("clustSize", d, env =
SCenv): partial argument match of 'env' to 'envir'
sampleSchemes : getSample: warning in assign("sampleName", "Synthetic
Sample of every ith room", env = SCenv): partial argument match of
'env' to 'envir'
sampleSchemes : refresh: no visible binding for global variable ‘SCenv’
sumSquares: warning in assign("X", x, env = SSenv): partial argument
match of 'env' to 'envir'
sumSquares: warning in assign("Y", y, env = SSenv): partial argument
match of 'env' to 'envir'
checking Rd files ... NOTE
prepare_Rd: myHist.Rd:20-22: Dropping empty section \details
prepare_Rd: myHist.Rd:23-25: Dropping empty section \value
prepare_Rd: myHist.Rd:26-28: Dropping empty section \note
prepare_Rd: myHist.Rd:31-33: Dropping empty section \examples
prepare_Rd: ratioCompare.Rd:10-11: Dropping empty section \arguments
prepare_Rd: ratioCompare.Rd:20: Dropping empty section \references
prepare_Rd: sampleAssign.Rd:26: Dropping empty section \references
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... NOTE
‘library’ or ‘require’ call not declared from: ‘gdata’
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... OK
checking data for ASCII and uncompressed saves ... OK
checking sizes of PDF files under ‘inst/doc’ ... OK
checking examples ... OK
checking PDF version of manual ... OK