• using R version 2.14.1 (2011-12-22)
  • using platform: i686-pc-linux-gnu (32-bit)
  • using session charset: UTF-8
  • using option ‘--no-vignettes’
  • checking for file ‘ModelMap/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘ModelMap’ version ‘2.1.1’
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... NOTE
    As from R 2.14.0 all packages need a namespace.
    One will be generated on installation, but it is better to handcraft a
    NAMESPACE file: R CMD build will produce a suitable starting point.
  • checking for executable files ... OK
  • checking whether package ‘ModelMap’ can be installed ... OK
  • checking installed package size ... NOTE
    installed size is 5.0Mb
    sub-directories of 1Mb or more:
    external 1.4Mb
    doc 3.4Mb
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    diagnostics.function: warning in jpeg(filename = IMPORTANCEfn, width =
    device.width, height = device.height, res = jpeg.res, unit = "in"):
    partial argument match of 'unit' to 'units'
    diagnostics.function: warning in jpeg(filename = THRESHOLDPLOTSfn,
    width = device.width, height = device.height, res = jpeg.res, unit =
    "in"): partial argument match of 'unit' to 'units'
    diagnostics.function: warning in jpeg(filename = SCATTERPLOTfn, width =
    device.width, height = device.height, res = jpeg.res, unit = "in"):
    partial argument match of 'unit' to 'units'
    model.interaction.plot: warning in jpeg(filename = INTERACTIONfn, width
    = device.width, height = device.height, res = jpeg.res, unit = "in"):
    partial argument match of 'unit' to 'units'
    production.prediction: warning in write(test_pred, file = asciifn, ncol
    = ncols, append = TRUE, sep = " "): partial argument match of 'ncol'
    to 'ncolumns'
    production.prediction: warning in write(test_mean, file = asciifn.mean,
    ncol = ncols, append = TRUE, sep = " "): partial argument match of
    'ncol' to 'ncolumns'
    production.prediction: warning in write(test_stdev, file =
    asciifn.stdev, ncol = ncols, append = TRUE, sep = " "): partial
    argument match of 'ncol' to 'ncolumns'
    production.prediction: warning in write(test_coefv, file =
    asciifn.coefv, ncol = ncols, append = TRUE, sep = " "): partial
    argument match of 'ncol' to 'ncolumns'
  • checking Rd files ... NOTE
    prepare_Rd: ModelMap-package.Rd:61-63: Dropping empty section \seealso
    prepare_Rd: ModelMap-package.Rd:64-66: Dropping empty section \examples
    prepare_Rd: build.rastLUT.Rd:39-41: Dropping empty section \note
    prepare_Rd: build.rastLUT.Rd:37: Dropping empty section \references
    prepare_Rd: build.rastLUT.Rd:42: Dropping empty section \seealso
    prepare_Rd: get.test.Rd:28-30: Dropping empty section \note
    prepare_Rd: get.test.Rd:26: Dropping empty section \references
    prepare_Rd: get.test.Rd:31: Dropping empty section \seealso
    prepare_Rd: internal.Rd:22-24: Dropping empty section \value
    prepare_Rd: internal.Rd:28-30: Dropping empty section \examples
    prepare_Rd: model.build.Rd:107-108: Dropping empty section \note
    prepare_Rd: model.diagnostics.Rd:110-111: Dropping empty section \note
    prepare_Rd: model.interaction.plot.Rd:79-80: Dropping empty section \value
    prepare_Rd: model.interaction.plot.Rd:88-90: Dropping empty section \note
    prepare_Rd: model.interaction.plot.Rd:93-95: Dropping empty section \seealso
    prepare_Rd: model.mapmake.Rd:85-86: Dropping empty section \note
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking examples ... OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... SKIPPED
  • checking re-building of vignettes ... SKIPPED
  • checking PDF version of manual ... OK