- using R version 3.0.0 (2013-04-03)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘MASS/DESCRIPTION’ ... OK
- this is package ‘MASS’ version ‘7.3-26’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘MASS’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking examples ... [13s/13s] OK
- checking differences from ‘MASS-Ex.Rout’ to ‘MASS-Ex.Rout.save’ ...
872c872
< -2.42080775 -0.61510519 -0.03573836 0.81641138 2.15153495
---
> -2.42080780 -0.61510520 -0.03573836 0.81641138 2.15153499
1530c1530
< factor(subject)2 -3.021e-15 2.828e-01 0.000 1.000000
---
> factor(subject)2 -2.300e-15 2.828e-01 0.000 1.000000
2383c2383
< ContHigh -2.159e-16 1.690e-01 0.000 1.000000
---
> ContHigh -1.490e-15 1.690e-01 0.000 1.000000
3232c3232
< -3.631e+01 7.292e-01 4.167e-01 6.030e-18
---
> -3.631e+01 7.292e-01 4.167e-01 -8.131e-17
3396c3396
< 0.07776401 3.08304824 3.30137838 3.44562531 2.80464433
---
> 0.07776401 3.08304824 3.30137838 3.44562531 2.80464434
3398c3398
< 2.60835015 3.03357724 3.52301734 3.38711844 3.46709395
---
> 2.60835015 3.03357725 3.52301734 3.38711844 3.46709396
3400c3400
< 3.81438456 3.73878664 3.51332580 3.39741114 3.47088607
---
> 3.81438456 3.73878664 3.51332581 3.39741115 3.47088608
3402c3402
< 3.72895847 3.31863862 3.37938672 2.96452195 3.58468686
---
> 3.72895847 3.31863862 3.37938673 2.96452195 3.58468686
3404c3404
< 3.39628029 3.36998871 -2.96015461
---
> 3.39628029 3.36998872 -2.96015460
3427c3427
< Achieved convergence tolerance: 4.889e-06
---
> Achieved convergence tolerance: 4.923e-06
3567c3567
< (Intercept) 2.7870650 (Intr)
---
> (Intercept) 2.7870651 (Intr)
3569c3569
< Residual 6.2483880
---
> Residual 6.2483879
3589c3589
< -4.05938661 -0.63108408 0.06551865 0.71786439 2.79454034
---
> -4.05938661 -0.63108408 0.06551865 0.71786438 2.79454034
3636c3636
< N:K 1 33.1 33.13 2.146 0.16865
---
> N:K 1 33.1 33.14 2.146 0.16865
3695c3695
< 54.02 57.45 60.77 50.12 50.52 56.35
---
> 54.03 57.45 60.77 50.12 50.52 56.35
3743c3743
< Nf 3 20020 6674 37.686 2.46e-12 ***
---
> Nf 3 20020 6673 37.686 2.46e-12 ***
3761c3761
< Nf 3 20020 6674 37.686 2.46e-12 ***
---
> Nf 3 20020 6673 37.686 2.46e-12 ***
3795c3795
< 104.50 109.79 97.62
---
> 104.50 109.79 97.63
5182c5182
< Achieved convergence tolerance: 4.354e-06
---
> Achieved convergence tolerance: 4.324e-06
OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [7s/7s] OK
Running ‘confint.R’ [0s/0s]
Running ‘fitdistr.R’ [0s/0s]
Comparing ‘fitdistr.Rout’ to ‘fitdistr.Rout.save’ ... OK
Running ‘glm.nb.R’ [1s/1s]
Running ‘hubers.R’ [0s/0s]
Running ‘lme.R’ [1s/1s]
Running ‘polr.R’ [1s/1s]
Running ‘profile.R’ [0s/0s]
Running ‘regression.R’ [2s/2s]
Comparing ‘regression.Rout’ to ‘regression.Rout.save’ ... OK
Running ‘rlm.R’ [1s/1s]
Running ‘scripts.R’ [0s/0s]
- checking PDF version of manual ... OK