• using R version 3.0.0 alpha (2013-03-16 r62280)
  • using platform: x86_64-apple-darwin10.8.0 (64-bit)
  • using session charset: ASCII
  • checking for file 'Bessel/DESCRIPTION' ... OK
  • this is package 'Bessel' version '0.5-4'
  • checking package namespace information ... OK
  • checking package dependencies ... NOTE
    Package suggested but not available for checking: 'gsl'
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package 'Bessel' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking sizes of PDF files under 'inst/doc' ... OK
  • checking installed files from 'inst/doc' ... OK
  • checking examples ... OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... OK
    Running 'Airy-tsts.R'
    Running 'Bessel_asymp.R'
    Running 'Hankel-tsts.R'
    Running 'IJKY.R'
    Comparing 'IJKY.Rout' to 'IJKY.Rout.save' ...7c7
    < The following object is masked from 'package:base':
    ---
    > The following object(s) are masked from 'package:base':
    15c15
    < The following object is masked from 'package:stats':
    ---
    > The following object(s) are masked from 'package:stats':
    19c19
    < The following object is masked from 'package:base':
    ---
    > The following object(s) are masked from 'package:base':
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in 'inst/doc' ... OK
  • checking running R code from vignettes ... WARNING
    Errors in running code in vignettes:
    when running code in 'other-Bessels.Rnw'
    ...
    The following object is masked from 'package:base':

    cbind, pmax, pmin, rbind


    > library(gsl)

    When sourcing 'other-Bessels.R':
    Error: there is no package called 'gsl'
    Execution halted
  • checking re-building of vignette PDFs ... NOTE
    Error in re-building vignettes:
    ...
    Loading required package: Rmpfr
    Loading required package: gmp

    Attaching package: 'gmp'

    The following object is masked from 'package:base':

    %*%, apply, crossprod, matrix, tcrossprod


    Attaching package: 'Rmpfr'

    The following object is masked from 'package:stats':

    pnorm, print.integrate

    The following object is masked from 'package:base':

    cbind, pmax, pmin, rbind


    Error: processing vignette 'other-Bessels.Rnw' failed with diagnostics:
    chunk 2 (label = gsl-do)
    Error in library(gsl) : there is no package called 'gsl'
    Execution halted
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning.
    NOTE: There were 2 notes.
    See
    '/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.0/Bessel.Rcheck/00check.log'
    for details.
  • elapsed time (check, wall clock): 0:53