• using R version 2.11.0 (2010-04-22)
• using session charset: ISO8859-1
• checking for file 'lemma/DESCRIPTION' ... OK
• this is package 'lemma' version '1.3-1'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking whether package 'lemma' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  lemmaPlots: no visible binding for global variable 'G'
  lemmaPlots: no visible binding for global variable 'dg'
  lemmaPlots: no visible binding for global variable 'n2'
  lemmaPlots: no visible binding for global variable 'n1'
  lemmaPlots: no visible binding for global variable 'p0'
  lemmaPlots: no visible binding for global variable 'tau'
  lemmaPlots: no visible binding for global variable 'sig2eb'
  lemmaPlots: no visible binding for global variable 'p1'
  lemmaPlots: no visible binding for global variable 'psi'
  lemmaPlots: no visible binding for global variable 'sig2psi'
  lemmaPlots: no visible binding for global variable 'p2'
  lemmaPlots: no visible binding for global variable 'mg'
  lemmaPlots: no visible binding for global variable 'f'
  lemmaPlots: no visible binding for global variable 'alpha_hat'
  lemmaPlots: no visible binding for global variable 'beta_hat'
  lemmaPlots: no visible binding for global variable 'pBH0'
  lemmaPlots: no visible binding for global variable 'RRfdr0'
  lemmaPlots: no visible binding for global variable 'genename'
  saveAsCsv: no visible binding for global variable 'dg'
  saveAsCsv: no visible binding for global variable 'pBH0'
  saveAsCsv: no visible binding for global variable 'RRfdr0'
  saveAsCsv: no visible binding for global variable 'RRfdr1'
  saveAsCsv: no visible binding for global variable 'RRfdr2'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking data for non-ASCII characters ... OK
• checking examples ... OK
• checking PDF version of manual ... OK