• using R version 2.11.1 Patched (2010-07-29 r52657)
  • using session charset: ISO8859-1
  • checking for file 'RobLoxBioC/DESCRIPTION' ... OK
  • this is package 'RobLoxBioC' version '0.7.1'
  • package encoding: latin1
  • checking package name space information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking whether package 'RobLoxBioC' can be installed ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the name space can be loaded with stated dependencies ... OK
  • checking whether the name space can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking examples ... OK
  • checking differences from 'RobLoxBioC-Ex.Rout' to 'RobLoxBioC-Ex.Rout.save' ...
    1d0
    < > options(pager = "console")
    15,16c14,15
    < :distr> Object oriented implementation of distributions (version
    < :distr> 2.2.3)
    ---
    > :distr> Object orientated implementation of distributions (version
    > :distr> 2.2.2)
    37d35
    < The following object(s) are masked from 'package:stats':
    39c37,41
    < df, qqplot, sd
    ---
    > The following object(s) are masked from package:stats :
    >
    > df,
    > qqplot,
    > sd
    44c46,47
    < The following object(s) are masked from 'package:grDevices':
    ---
    >
    > The following object(s) are masked from package:grDevices :
    63d65
    < The following object(s) are masked from 'package:stats':
    65c67,72
    < IQR, mad, median, var
    ---
    > The following object(s) are masked from package:stats :
    >
    > IQR,
    > mad,
    > median,
    > var
    75,76c82,83
    < :distrMod> Object oriented implementation of probability models
    < :distrMod> (version 2.2.2)
    ---
    > :distrMod> Object orientated implementation of probability models
    > :distrMod> (version 2.2)
    94,96d100
    < The following object(s) are masked from 'package:stats4':
    <
    < confint
    98c102
    < The following object(s) are masked from 'package:stats':
    ---
    > The following object(s) are masked from package:stats4 :
    102d105
    < The following object(s) are masked from 'package:base':
    104c107,109
    < norm
    ---
    > The following object(s) are masked from package:stats :
    >
    > confint
    121c126,127
    < The following object(s) are masked from 'package:stats':
    ---
    >
    > The following object(s) are masked from package:stats :
    125c131,132
    < The following object(s) are masked from 'package:graphics':
    ---
    >
    > The following object(s) are masked from package:graphics :
    132c139,140
    < The following object(s) are masked from 'package:evd':
    ---
    >
    > The following object(s) are masked from package:evd :
    188c196
    < [1] 0.1755693 0.1567706 0.1571410 0.1609188 0.1617499 0.1607157 0.1382646
    ---
    > [1] 0.1642185 0.1567706 0.1571387 0.1609188 0.1617499 0.1607157 0.1382646
    306c314
    < 9.42 0.52 9.94
    ---
    > 11.692 0.888 14.859
    OK
  • checking PDF version of manual ... OK