• using R version 2.11.0 (2010-04-22)
• using session charset: ISO8859-1
• checking for file 'NADA/DESCRIPTION' ... OK
• this is package 'NADA' version '1.5-2'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking whether package 'NADA' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... WARNING
  checkRd: (3) file 'summary.cenreg-class.Rd': Empty section 'Methods'
• checking Rd metadata ... WARNING
  Rd files with duplicated name 'Silver':
  Ag.Rd Silver.Rd
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... WARNING
  Codoc mismatches from documentation object 'boxplot-methods':
  \S4method{boxplot}{ros}
  Code: function(x, log = "y", range = 0, ...)
  Docs: function(x, ...)
  Argument names in code not in docs:
  log range
  Mismatches in argument names:
  Position: 2 Code: log Docs: ...
  
  Codoc mismatches from documentation object 'median-methods':
  \S4method{median}{ros}
  Code: function(x, na.rm = FALSE)
  Docs: function(x, na.rm = FALSE, ...)
  Argument names in docs not in code:
  ...
  \S4method{median}{cenfit}
  Code: function(x, na.rm = FALSE)
  Docs: function(x, na.rm = FALSE, ...)
  Argument names in docs not in code:
  ...
  
  Codoc mismatches from documentation object 'predict-methods':
  \S4method{predict}{cenfit}
  Code: function(object, newdata, conf.int = FALSE)
  Docs: function(object, newdata, conf.int = FALSE, ...)
  Argument names in docs not in code:
  ...
  \S4method{pexceed}{cenfit}
  Code: function(object, newdata, conf.int = FALSE)
  Docs: function(object, newdata, conf.int = FALSE, ...)
  Argument names in docs not in code:
  ...
  \S4method{pexceed}{ros}
  Code: function(object, newdata, conf.int = FALSE, conf.level = 0.95)
  Docs: function(object, newdata, conf.int = FALSE, ...)
  Argument names in code not in docs:
  conf.level
  Argument names in docs not in code:
  ...
  Mismatches in argument names:
  Position: 4 Code: conf.level Docs: ...
  
  Codoc mismatches from documentation object 'quantile-methods':
  \S4method{quantile}{ros}
  Code: function(x, probs = NADAprobs, ...)
  Docs: function(object, probs = NADAprobs, ...)
  Argument names in code not in docs:
  x
  Argument names in docs not in code:
  object
  Mismatches in argument names:
  Position: 1 Code: x Docs: object
  \S4method{quantile}{cenfit}
  Code: function(x, probs = NADAprobs, conf.int = FALSE, ...)
  Docs: function(object, probs = NADAprobs, conf.int = FALSE, ...)
  Argument names in code not in docs:
  x
  Argument names in docs not in code:
  object
  Mismatches in argument names:
  Position: 1 Code: x Docs: object
  
  Codoc mismatches from documentation object 'summary-methods':
  \S4method{summary}{ros}
  Code: function(object, plot = FALSE, ...)
  Docs: function(object, ...)
  Argument names in code not in docs:
  plot
  Mismatches in argument names:
  Position: 2 Code: plot Docs: ...
  \S4method{summary}{cenfit}
  Code: function(object, times, censored = FALSE, scale = 1, ...)
  Docs: function(object, ...)
  Argument names in code not in docs:
  times censored scale
  Mismatches in argument names:
  Position: 2 Code: times Docs: ...
  
  S4 class codoc mismatches from documentation object 'cenreg-class':
  Slots for class 'cenreg'
  Code: conf.int n n.cen survreg y ycen
  Docs: survreg
  
  S4 class codoc mismatches from documentation object 'summary.cenreg-class':
  Slots for class 'summary.cenreg'
  Code: .Data
  
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking data for non-ASCII characters ... OK
• checking examples ... OK
• checking PDF version of manual ... OK