• using R version 3.0.1 Patched (2013-05-18 r62762)
  • using platform: i386-pc-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • checking for file ‘topicmodels/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘topicmodels’ version ‘0.1-9’
  • package encoding: UTF-8
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘topicmodels’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... OK
  • checking for unstated dependencies in vignettes ... NOTE
    ‘data(package=)’ call not declared from: ‘corpus.JSS.papers’
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [58s/78s] ERROR
    Errors in running code in vignettes:
    when running code in ‘topicmodels.Rnw’
    ...
    6: withVisible(eval(ei, envir))
    7: source(output, echo = TRUE)
    8: doTryCatch(return(expr), name, parentenv, handler)
    9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
    10: tryCatchList(expr, classes, parentenv, handlers)
    11: tryCatch({ source(output, echo = TRUE)}, error = function(e) { cat("\n When sourcing ", sQuote(output), ":\n", sep = "") stop(conditionMessage(e), call. = FALSE, domain = NA)})
    12: tools:::.run_one_vignette("topicmodels.Rnw", "/home/ripley/R/packages/tests32/topicmodels/vignettes", pkgdir = "/home/ripley/R/packages/tests32/topicmodels")
    aborting ...

    ... incomplete output. Crash?