• using R version 3.0.1 Patched (2013-06-19 r62991)
• using platform: i386-pc-solaris2.10 (32-bit)
• using session charset: UTF-8
• checking for file ‘roxygen/DESCRIPTION’ ... OK
• this is package ‘roxygen’ version ‘0.1-3’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Package suggested but not available for checking: ‘Rgraphviz’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘roxygen’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  copy.dir: warning in list.files(source, full.name = TRUE, recursive =
  TRUE, all.files = TRUE): partial argument match of 'full.name' to
  'full.names'
  new_cache : cache_set: warning in assign(key, value, env = cache):
  partial argument match of 'env' to 'envir'
  new_cache : cache_get: warning in get(key, env = cache, inherits =
  FALSE): partial argument match of 'env' to 'envir'
  new_cache : cache_has_key: warning in exists(key, env = cache, inherits
  = FALSE): partial argument match of 'env' to 'envir'
  make.callgraph.roclet : graphviz: no visible global function definition
  for ‘addEdge’
  make.callgraph.roclet : graphviz: no visible global function definition
  for ‘agopenSimple’
  make.callgraph.roclet : graphviz: no visible global function definition
  for ‘graphDataDefaults<-’
  make.callgraph.roclet : graphviz: no visible global function definition
  for ‘nodeDataDefaults<-’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... NOTE
  The following files should probably not be installed:
  ‘GSoC-idea.tex’
  
  Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
  or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
• checking examples ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ... OK
  Running ‘test-all.R’
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK
  NOTE: There were 3 notes.
  See
  ‘/home/ripley/R/packages/tests32/roxygen.Rcheck/00check.log’
  for details.