• using R version 3.0.1 Patched (2013-05-22 r62772)
  • using platform: i386-pc-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • checking for file ‘rgenoud/DESCRIPTION’ ... OK
  • this is package ‘rgenoud’ version ‘5.7-9’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘rgenoud’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    genoud : fnLexicalSort: no visible binding for global variable ‘indx’
    genoud: multiple local function definitions for ‘fn1.bfgs’ with
    different formal arguments
    genoud: multiple local function definitions for ‘gr1’ with different
    formal arguments
    genoud: multiple local function definitions for ‘hess.fn’ with
    different formal arguments
    genoud_transform : fnLexicalSort: no visible binding for global
    variable ‘indx’
    genoud_transform: multiple local function definitions for ‘fn1.bfgs’
    with different formal arguments
    genoud_transform: multiple local function definitions for ‘gr1’ with
    different formal arguments
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... [10s/11s] OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... [19s/23s] OK
    Running ‘tests.R’ [18s/22s]
    Comparing ‘tests.Rout’ to ‘tests.Rout.save’ ...17c17
    < Wed May 22 17:10:52 2013
    ---
    > Mon May 6 16:18:17 2013
    175,176c175,176
    < Wed May 22 17:10:53 2013
    < Total run time : 0 hours 0 minutes and 1 seconds
    ---
    > Mon May 6 16:18:17 2013
    > Total run time : 0 hours 0 minutes and 0 seconds
    204c204
    < Wed May 22 17:10:53 2013
    ---
    > Mon May 6 16:18:17 2013
    362c362
    < Wed May 22 17:10:55 2013
    ---
    > Mon May 6 16:18:19 2013
    398c398
    < Wed May 22 17:10:55 2013
    ---
    > Mon May 6 16:18:19 2013
    556,557c556,557
    < Wed May 22 17:10:58 2013
    < Total run time : 0 hours 0 minutes and 3 seconds
    ---
    > Mon May 6 16:18:21 2013
    > Total run time : 0 hours 0 minutes and 2 seconds
    606c606
    < Wed May 22 17:10:58 2013
    ---
    > Mon May 6 16:18:22 2013
    828,829c828,829
    < Wed May 22 17:11:13 2013
    < Total run time : 0 hours 0 minutes and 15 seconds
    ---
    > Mon May 6 16:18:30 2013
    > Total run time : 0 hours 0 minutes and 8 seconds
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... OK
  • checking re-building of vignette PDFs ... OK
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/home/ripley/R/packages/tests32/rgenoud.Rcheck/00check.log’
    for details.