• using R version 2.15.0 Patched (2012-05-26 r59446)
  • using platform: i386-pc-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • checking for file ‘randomSurvivalForest/DESCRIPTION’ ... OK
  • this is package ‘randomSurvivalForest’ version ‘3.6.3’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for .dll and .exe files ... OK
  • checking whether package ‘randomSurvivalForest’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    File ‘randomSurvivalForest/R/zzz.R’:
    .onAttach calls:
    cat("\n")
    cat(paste(pkgname, RSFver))
    cat("\n")
    cat("\n")
    cat("Type rsf.news() to see new features, changes, and bug fixes.")
    cat("\n")
    cat("\n")

    Package startup functions should use ‘packageStartupMessage’ to
    generate messages.
    See section ‘Good practice’ in ?.onAttach.
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... NOTE
    S3 methods shown with full name in documentation object 'max.subtree':
    ‘max.subtree’

    S3 methods shown with full name in documentation object 'plot.ensemble':
    ‘plot.ensemble’

    S3 methods shown with full name in documentation object 'plot.error':
    ‘plot.error’ ‘plot.rsf’

    S3 methods shown with full name in documentation object 'plot.proximity':
    ‘plot.proximity’

    S3 methods shown with full name in documentation object 'plot.variable':
    ‘plot.variable’

    S3 methods shown with full name in documentation object 'predict.rsf':
    ‘predict.rsf’

    S3 methods shown with full name in documentation object 'print.rsf':
    ‘print.rsf’

    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... WARNING

    Note: significantly better compression could be obtained
    by using R CMD build --resave-data
    old_size new_size compress
    pbc.rda 11Kb 7Kb xz
    vdv.rda 817Kb 563Kb xz
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... NOTE
    File ‘/home/ripley/R/Lib32/randomSurvivalForest/libs/randomSurvivalForest.so’:
    Found ‘exit’, possibly from ‘exit’ (C)
    Objects: ‘nrutil.o’, ‘rsf.o’, ‘rsfFactorOps.o’, ‘rsfImportance.o’,
    ‘rsfImpute.o’, ‘rsfSplit.o’, ‘rsfSplitUtil.o’, ‘rsfStack.o’,
    ‘rsfTree.o’, ‘rsfUtil.o’

    Compiled code should not call functions which might terminate R nor
    write to stdout/stderr instead of to the console.

    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning.
    NOTE: There were 3 notes.
    See
    ‘/home/ripley/R/packages/tests32/randomSurvivalForest.Rcheck/00check.log’
    for details.