• using R version 3.0.1 Patched (2013-05-18 r62762)
  • using platform: i386-pc-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • checking for file ‘plgp/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘plgp’ version ‘1.1-5’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘plgp’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... NOTE
    File
    LICENSE
    is not mentioned in the DESCRIPTION file.
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    PL: no visible binding for '<<-' assignment to ‘peach’
    PL: no visible binding for global variable ‘peach’
    PL.clear: no visible binding for '<<-' assignment to ‘pall’
    PL.clear: no visible binding for '<<-' assignment to ‘peach’
    PL.clear: no visible binding for '<<-' assignment to ‘psave’
    addpall.CGP: no visible binding for '<<-' assignment to ‘pall’
    addpall.CGP: no visible binding for global variable ‘pall’
    addpall.ConstGP: no visible binding for '<<-' assignment to ‘pall’
    addpall.ConstGP: no visible binding for global variable ‘pall’
    addpall.GP: no visible binding for '<<-' assignment to ‘pall’
    addpall.GP: no visible binding for global variable ‘pall’
    alc.ConstGP: no visible binding for global variable ‘pall’
    alc.GP: no visible binding for global variable ‘pall’
    alc.adapt: no visible binding for global variable ‘pall’
    alc.const.adapt: no visible binding for global variable ‘pall’
    data.CGP.adapt: no visible binding for global variable ‘Xcand’
    data.CGP.adapt: no visible binding for '<<-' assignment to ‘Xcand’
    data.CGP.adapt: no visible binding for global variable ‘pall’
    data.ConstGP.improv: no visible binding for global variable ‘pall’
    data.ConstGP.improv: no visible binding for '<<-' assignment to ‘psave’
    data.ConstGP.improv: no visible binding for global variable ‘psave’
    data.GP.improv: no visible binding for global variable ‘Xcand’
    data.GP.improv: no visible binding for global variable ‘pall’
    data.GP.improv: no visible binding for '<<-' assignment to ‘Xcand’
    data.GP.improv: no visible binding for '<<-' assignment to ‘psave’
    data.GP.improv: no visible binding for global variable ‘psave’
    draw.CGP: no visible binding for global variable ‘pall’
    draw.GP: no visible binding for global variable ‘pall’
    ei.adapt: no visible binding for global variable ‘pall’
    entropy.adapt: no visible binding for global variable ‘pall’
    findmin.ConstGP: no visible binding for global variable ‘pall’
    findmin.ConstGP: no visible binding for global variable ‘peach’
    findmin.GP: no visible binding for global variable ‘pall’
    getmap.CGP: no visible binding for global variable ‘peach’
    getmap.GP: no visible binding for global variable ‘peach’
    ieci.ConstGP: no visible binding for global variable ‘pall’
    ieci.GP: no visible binding for global variable ‘pall’
    ieci.adapt: no visible binding for global variable ‘pall’
    ieci.const.adapt: no visible binding for global variable ‘pall’
    init.CGP: no visible binding for global variable ‘pall’
    init.GP: no visible binding for global variable ‘pall’
    latents.CGP: no visible binding for global variable ‘peach’
    latents.CGP: no visible binding for global variable ‘pall’
    lpredprob.GP: no visible binding for global variable ‘pall’
    mindist.adapt: no visible binding for global variable ‘pall’
    papply: no visible binding for global variable ‘peach’
    params.CGP: no visible binding for global variable ‘peach’
    params.ConstGP: no visible binding for global variable ‘peach’
    params.GP: no visible binding for global variable ‘peach’
    pred.CGP: no visible binding for global variable ‘pall’
    pred.ConstGP: no visible binding for global variable ‘pall’
    pred.GP: no visible binding for global variable ‘pall’
    pred.mean.GP: no visible binding for global variable ‘pall’
    propagate.GP: no visible binding for global variable ‘pall’
    resample: no visible binding for global variable ‘peach’
    resample: no visible binding for '<<-' assignment to ‘peach’
    updat.GP: no visible binding for global variable ‘pall’
    util.GP: no visible binding for global variable ‘pall’
    util.GP: no visible binding for '<<-' assignment to ‘pall’
    var.adapt: no visible binding for global variable ‘pall’
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
    NOTE: There were 2 notes.
    See
    ‘/home/ripley/R/packages/tests32/plgp.Rcheck/00check.log’
    for details.