- using R version 3.0.1 Patched (2013-06-14 r62965)
- using platform: i386-pc-solaris2.10 (32-bit)
- using session charset: UTF-8
- checking for file ‘lme4/DESCRIPTION’ ... OK
- this is package ‘lme4’ version ‘0.999999-2’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘lme4’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable compilation flags in Makevars ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... [23s/30s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [144s/177s] OK
Running ‘Gamma.R’ [9s/12s]
Running ‘agq.R’
Running ‘coefs.R’
Running ‘drop.R’
Running ‘extras.R’
Running ‘getME.R’
Running ‘lmList.R’
Running ‘lmer-1.R’ [11s/14s]
Comparing ‘lmer-1.Rout’ to ‘lmer-1.Rout.save’ ...427,428d426
< Warning message:
< In mer_finalize(ans) : singular convergence (7)
444c442
< 140.642 -1.424 -1.424 0.014
---
> 140.641 -1.424 -1.424 0.014
448,449d445
< Warning message:
< In mer_finalize(ans) : singular convergence (7)
477c473
< 1 0 300 900 7
---
> 1 0 300 900 4
519c515
< Error in (function (fr, FL, start, REML, verbose) :
---
> Error in function (fr, FL, start, REML, verbose) :
Running ‘lmer-conv.R’
Running ‘lmer.R’
Running ‘nlmer-conv.R’ [29s/37s]
Running ‘nlmer.R’ [28s/33s]
Comparing ‘nlmer.Rout’ to ‘nlmer.Rout.save’ ...60,62c60,62
< Subject lKa 0.227491 0.47696
< Subject lCl 0.015739 0.12545
< Residual 0.591691 0.76921
---
> Subject lKa 0.227490 0.47696
> Subject lCl 0.015738 0.12545
> Residual 0.591692 0.76921
68c68
< lKa 0.47409 0.15291 3.10
---
> lKa 0.47408 0.15291 3.10
Running ‘sigma.R’
Running ‘simulate.R’ [9s/11s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [16s/20s] OK
- checking re-building of vignette PDFs ... [14s/16s] OK
- checking PDF version of manual ... OK