- using R version 2.15.0 Patched (2012-05-26 r59446)
- using platform: i386-pc-solaris2.10 (32-bit)
- using session charset: UTF-8
- checking for file ‘fields/DESCRIPTION’ ... OK
- this is package ‘fields’ version ‘6.6.3’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for .dll and .exe files ... OK
- checking whether package ‘fields’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
sreg: warning in gcv.sreg(out, lambda = lam, cost = cost, offset =
offset, nstep.cv = nstep.cv, verbose = verbose, trmin = trmin, trmax
= trmax, rmse = rmse): partial argument match of 'lambda' to
'lambda.grid'
in.land.grid: no visible binding for global variable ‘world.dat’
world.land: no visible binding for global variable ‘world.dat’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'fields internal':
‘image.plot.info’ ‘image.plot.plt’ ‘summary.gcv.Krig’
‘summary.gcv.sreg’
S3 methods shown with full name in documentation object 'image.plot':
‘image.plot’
S3 methods shown with full name in documentation object 'image.smooth':
‘image.smooth’
S3 methods shown with full name in documentation object 'predict.derivative':
‘predict.derivative’
S3 methods shown with full name in documentation object 'predict.se':
‘predict.se’
S3 methods shown with full name in documentation object 'predict.surface':
‘predict.surface’ ‘predict.surface.se’ ‘predict.surface.derivative’
S3 methods shown with full name in documentation object 'vgram.matrix':
‘plot.vgram.matrix’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking examples ... [116s/139s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [217s/261s] OK
Running ‘Krig.Z.test.R’
Comparing ‘Krig.Z.test.Rout’ to ‘Krig.Z.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Krig.se.W.R’
Comparing ‘Krig.se.W.Rout’ to ‘Krig.se.W.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Krig.se.grid.test.R’
Comparing ‘Krig.se.grid.test.Rout’ to ‘Krig.se.grid.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Krig.se.test.R’ [26s/29s]
Comparing ‘Krig.se.test.Rout’ to ‘Krig.se.test.Rout.save’ ...10,13c10,13
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
20c20
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Krig.test.R’
Comparing ‘Krig.test.Rout’ to ‘Krig.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Krig.test.W.R’
Comparing ‘Krig.test.W.Rout’ to ‘Krig.test.W.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Likelihood.test.R’
Comparing ‘Likelihood.test.Rout’ to ‘Likelihood.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘REMLest.test.R’ [27s/31s]
Comparing ‘REMLest.test.Rout’ to ‘REMLest.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Tps.test.R’
Comparing ‘Tps.test.Rout’ to ‘Tps.test.Rout.save’ ...11,14c11,14
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
21c21
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘Wend.test.R’
Comparing ‘Wend.test.Rout’ to ‘Wend.test.Rout.save’ ...12,15c12,15
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
22c22
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘cov.test.R’
Comparing ‘cov.test.Rout’ to ‘cov.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘derivative.test.R’ [12s/14s]
Comparing ‘derivative.test.Rout’ to ‘derivative.test.Rout.save’ ...11,14c11,14
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
21c21
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘diag.multiply.test.R’
Comparing ‘diag.multiply.test.Rout’ to ‘diag.multiply.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘diagonal2.test.R’
Comparing ‘diagonal2.test.Rout’ to ‘diagonal2.test.Rout.save’ ...4,7c4,7
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
14c14
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘evlpoly.test.R’
Comparing ‘evlpoly.test.Rout’ to ‘evlpoly.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘mKrig.Z.R’
Running ‘mKrig.parameters.test.R’ [89s/110s]
Comparing ‘mKrig.parameters.test.Rout’ to ‘mKrig.parameters.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘mKrig.se.test.R’
Comparing ‘mKrig.se.test.Rout’ to ‘mKrig.se.test.Rout.save’ ...14,17c14,17
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
24c24
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘mKrig.test.R’
Comparing ‘mKrig.test.Rout’ to ‘mKrig.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘misc.test.R’
Comparing ‘misc.test.Rout’ to ‘misc.test.Rout.save’ ...9,12c9,12
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
19c19
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘spam.test.R’
Comparing ‘spam.test.Rout’ to ‘spam.test.Rout.save’ ...13,16c13,16
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
23c23
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘sreg.test.R’
Comparing ‘sreg.test.Rout’ to ‘sreg.test.Rout.save’ ...12,15c12,15
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
22c22
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
Running ‘vgram.test.R’
Comparing ‘vgram.test.Rout’ to ‘vgram.test.Rout.save’ ...12,15c12,15
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
22c22
< backsolve, forwardsolve
---
> backsolve, forwardsolve, norm
- checking PDF version of manual ... OK
NOTE: There were 2 notes.
See
‘/home/ripley/R/packages/tests32/fields.Rcheck/00check.log’
for details.