* installing to library ‘/home/ripley/R/Lib32’ * installing *source* package ‘bayesSurv’ ... ** package ‘bayesSurv’ successfully unpacked and MD5 sums checked ** libs CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c AK_BLAS_LAPACK.cpp -o AK_BLAS_LAPACK.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c ARS2.cpp -o ARS2.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c GMRF.cpp -o GMRF.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c GMRF_Gspline.cpp -o GMRF_Gspline.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c GMRF_Gspline_Util.cpp -o GMRF_Gspline_Util.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline.cpp -o Gspline.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline_update_Intcpt.cpp -o Gspline_update_Intcpt.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline_update_Scale.cpp -o Gspline_update_Scale.o "Gspline_update_Scale.cpp", line 94: Warning (Anachronism): Formal argument eval2 of type extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&) in call to solver_newton_raphson(double*, double*, double*, const double*, const double*, const int*, extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&), int*, const int*, const double*, const double*, int*) is being passed void(*)(const double*,double*,double*,double*,const double*,const int*,const int&). "Gspline_update_Scale.cpp", line 115: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,const double*,const int*) in call to Slice_sampler::ss_exact_overrelax(double*, double*, const double*, const double*, extern "C" void(*)(const double*,double*,const double*,const int*), const double*, const int*) is being passed void(*)(const double*,double*,const double*,const int*). "Gspline_update_Scale.cpp", line 118: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,const double*,const int*) in call to Slice_sampler::ss_exact_sample(double*, double*, double*, const double*, const double*, extern "C" void(*)(const double*,double*,const double*,const int*), const double*, const int*) is being passed void(*)(const double*,double*,const double*,const int*). 3 Warning(s) detected. CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline_update_a.cpp -o Gspline_update_a.o "Gspline_update_a.cpp", line 588: Warning (Anachronism): Formal argument eval2 of type extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&) in call to newton_raphson(double*, double*, double*, double*, const double*, const int*, extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&), int*, const int*, const int*, const double*, const double*, int*) is being passed void(*)(const double*,double*,double*,double*,const double*,const int*,const int&). "Gspline_update_a.cpp", line 669: Warning (Anachronism): Formal argument eval2 of type extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&) in call to solver_newton_raphson(double*, double*, double*, const double*, const double*, const int*, extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&), int*, const int*, const double*, const double*, int*) is being passed void(*)(const double*,double*,double*,double*,const double*,const int*,const int&). "Gspline_update_a.cpp", line 688: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,const double*,const int*) in call to Slice_sampler::ss_exact_overrelax(double*, double*, const double*, const double*, extern "C" void(*)(const double*,double*,const double*,const int*), const double*, const int*) is being passed void(*)(const double*,double*,const double*,const int*). "Gspline_update_a.cpp", line 691: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,const double*,const int*) in call to Slice_sampler::ss_exact_sample(double*, double*, double*, const double*, const double*, extern "C" void(*)(const double*,double*,const double*,const int*), const double*, const int*) is being passed void(*)(const double*,double*,const double*,const int*). "Gspline_update_a.cpp", line 722: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,double*,const double*,const int*) in call to ARS::sample_(int*, double*, extern "C" void(*)(const double*,double*,double*,const double*,const int*), const double*, const int*, double*, int*) is being passed void(*)(const double*,double*,double*,const double*,const int*). 5 Warning(s) detected. CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline_update_gamma.cpp -o Gspline_update_gamma.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline_update_lambda.cpp -o Gspline_update_lambda.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Gspline_update_sigma.cpp -o Gspline_update_sigma.o "Gspline_update_sigma.cpp", line 78: Warning (Anachronism): Formal argument eval2 of type extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&) in call to solver_newton_raphson(double*, double*, double*, const double*, const double*, const int*, extern "C" void(*)(const double*,double*,double*,double*,const double*,const int*,const int&), int*, const int*, const double*, const double*, int*) is being passed void(*)(const double*,double*,double*,double*,const double*,const int*,const int&). "Gspline_update_sigma.cpp", line 100: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,const double*,const int*) in call to Slice_sampler::ss_exact_overrelax(double*, double*, const double*, const double*, extern "C" void(*)(const double*,double*,const double*,const int*), const double*, const int*) is being passed void(*)(const double*,double*,const double*,const int*). "Gspline_update_sigma.cpp", line 103: Warning (Anachronism): Formal argument eval of type extern "C" void(*)(const double*,double*,const double*,const int*) in call to Slice_sampler::ss_exact_sample(double*, double*, double*, const double*, const double*, extern "C" void(*)(const double*,double*,const double*,const int*), const double*, const int*) is being passed void(*)(const double*,double*,const double*,const int*). 3 Warning(s) detected. CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c List.cpp -o List.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c MHblocks.cpp -o MHblocks.o "MHblocks.cpp", line 253: Warning (Anachronism): Assigning extern "C" double(*)(double,double,double,int) to double(*)(double,double,double,int). 1 Warning(s) detected. CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c MHproposal.cpp -o MHproposal.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Mvtdist3.cpp -o Mvtdist3.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c Slice_sampler2.cpp -o Slice_sampler2.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c arms.cpp -o arms.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c arrays2Mat.cpp -o arrays2Mat.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c bayesBisurvreg.cpp -o bayesBisurvreg.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c bayesDensity.cpp -o bayesDensity.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c bayesGspline.cpp -o bayesGspline.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c bayesHistogram.cpp -o bayesHistogram.o CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c bayessurvreg1.cpp -o bayessurvreg1.o "bayessurvreg1.cpp", line 454: Error: Could not find a match for logLikelihood(double*, double*, int*, double*, double*, int[1], int*, double*, double*, double*, double*, int[1], int*, extern "C" double(*)(const double)) needed in bayessurvreg1(char**, int*, double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, int*, double*, double*, double*, int*, double*, int*, double*, int*, double*, int*, double*, int*, int*, double*, int*). "bayessurvreg1.cpp", line 630: Error: Could not find a match for logLikelihood(double*, double*, int*, double*, double*, int[1], int*, double*, double*, double*, double*, int[1], int*, extern "C" double(*)(const double)) needed in bayessurvreg1(char**, int*, double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, int*, double*, double*, double*, int*, double*, int*, double*, int*, double*, int*, double*, int*, int*, double*, int*). "bayessurvreg1.cpp", line 636: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to updateWeights(double**, double**, double*, double*, double**, double**, double*, double**, double**, const double*, const double*, const double*, const double*, const covMatrix*, const int*, const int*, const double*, const double*, const int*, const double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 647: Error: Could not find a match for logLikelihood(double*, double*, int*, double*, double*, int[1], int*, double*, double*, double*, double*, int[1], int*, extern "C" double(*)(const double)) needed in bayessurvreg1(char**, int*, double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, int*, double*, double*, double*, int*, double*, int*, double*, int*, double*, int*, double*, int*, int*, double*, int*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument logdu of type double(*)(const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double*,const double*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument transu of type void(*)(double*,const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument invtransu of type void(*)(double*,const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument logJtransu of type double(*)(const double*,const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double*,const double*,const double*). "bayessurvreg1.cpp", line 665: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument logdu of type double(*)(const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" double(*)(const double*,const double*). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument transu of type void(*)(double*,const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument invtransu of type void(*)(double*,const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument logJtransu of type double(*)(const double*,const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" double(*)(const double*,const double*,const double*). "bayessurvreg1.cpp", line 695: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 722: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to updateRandom(bblocks*, double*, double*, double*, double*, double*, double*, double*, double*, const double*, const double*, const covMatrix*, const double*, const double*, double**, const List<int>*, const int*, double(*)(double), const int*, const int*, const int*, const int*, const int*, const int*, const double*, const double*, const double*, const double*) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 734: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to updateRegres(MHblocks*, double**, double**, double*, double**, double**, double*, double**, double**, const double*, const double*, const double*, const covMatrix*, const double*, double***, const int*, const int*, double(*)(double), const int*, const int*, const int*, const int*, const int*, const int*, const int*, const int*, const int*, const double*, const double*, const double*, const double*) is being passed extern "C" double(*)(const double). 3 Error(s) and 13 Warning(s) detected. *** Error code 2 make: Fatal error: Command failed for target `bayessurvreg1.o' Current working directory /tmp/RtmpInayIW/R.INSTALL61135a6c22aa/bayesSurv/src CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c bayessurvreg1.cpp -o bayessurvreg1.o "bayessurvreg1.cpp", line 454: Error: Could not find a match for logLikelihood(double*, double*, int*, double*, double*, int[1], int*, double*, double*, double*, double*, int[1], int*, extern "C" double(*)(const double)) needed in bayessurvreg1(char**, int*, double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, int*, double*, double*, double*, int*, double*, int*, double*, int*, double*, int*, double*, int*, int*, double*, int*). "bayessurvreg1.cpp", line 630: Error: Could not find a match for logLikelihood(double*, double*, int*, double*, double*, int[1], int*, double*, double*, double*, double*, int[1], int*, extern "C" double(*)(const double)) needed in bayessurvreg1(char**, int*, double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, int*, double*, double*, double*, int*, double*, int*, double*, int*, double*, int*, double*, int*, int*, double*, int*). "bayessurvreg1.cpp", line 636: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to updateWeights(double**, double**, double*, double*, double**, double**, double*, double**, double**, const double*, const double*, const double*, const double*, const covMatrix*, const int*, const int*, const double*, const double*, const int*, const double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 647: Error: Could not find a match for logLikelihood(double*, double*, int*, double*, double*, int[1], int*, double*, double*, double*, double*, int[1], int*, extern "C" double(*)(const double)) needed in bayessurvreg1(char**, int*, double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, int*, double*, double*, double*, int*, double*, int*, double*, int*, double*, int*, double*, int*, int*, double*, int*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument logdu of type double(*)(const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double*,const double*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument transu of type void(*)(double*,const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument invtransu of type void(*)(double*,const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 660: Warning (Anachronism): Formal argument logJtransu of type double(*)(const double*,const double*,const double*) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double*,const double*,const double*). "bayessurvreg1.cpp", line 665: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to birthDeath(int*, int*, int*, double*, double**, double**, double*, double**, double**, double*, double*, double*, double*, int*, List<int>*, int*, int*, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const double*, const covMatrix*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double*, const int*, const int*, const int*, const int*, const int*, const int*, double(*)(double)) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument logdu of type double(*)(const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" double(*)(const double*,const double*). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument transu of type void(*)(double*,const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument invtransu of type void(*)(double*,const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" void(*)(double*,const double*,const double*). "bayessurvreg1.cpp", line 691: Warning (Anachronism): Formal argument logJtransu of type double(*)(const double*,const double*,const double*) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" double(*)(const double*,const double*,const double*). "bayessurvreg1.cpp", line 695: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to splitCombine(int*, int*, double*, double**, double**, int*, double**, double**, double**, int*, List<int>**, int**, int*, double**, double**, double**, int*, List<int>**, int**, double*, double(*)(const double*,const double*), void(*)(double*,const double*,const double*), void(*)(double*,const double*,const double*), double(*)(const double*,const double*,const double*), const double*, const double*, const double*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const int*, double(*)(double), const int*) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 722: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to updateRandom(bblocks*, double*, double*, double*, double*, double*, double*, double*, double*, const double*, const double*, const covMatrix*, const double*, const double*, double**, const List<int>*, const int*, double(*)(double), const int*, const int*, const int*, const int*, const int*, const int*, const double*, const double*, const double*, const double*) is being passed extern "C" double(*)(const double). "bayessurvreg1.cpp", line 734: Warning (Anachronism): Formal argument logdtrans of type double(*)(double) in call to updateRegres(MHblocks*, double**, double**, double*, double**, double**, double*, double**, double**, const double*, const double*, const double*, const covMatrix*, const double*, double***, const int*, const int*, double(*)(double), const int*, const int*, const int*, const int*, const int*, const int*, const int*, const int*, const int*, const double*, const double*, const double*, const double*) is being passed extern "C" double(*)(const double). 3 Error(s) and 13 Warning(s) detected. *** Error code 2 make: Fatal error: Command failed for target `bayessurvreg1.o' Current working directory /tmp/RtmpInayIW/R.INSTALL61135a6c22aa/bayesSurv/src ERROR: compilation failed for package ‘bayesSurv’ * removing ‘/home/ripley/R/Lib32/bayesSurv’ real 32.9 user 25.8 sys 4.1