- using R version 3.0.1 Patched (2013-06-09 r62912)
- using platform: i386-pc-solaris2.10 (32-bit)
- using session charset: UTF-8
- checking for file ‘VLMC/DESCRIPTION’ ... OK
- this is package ‘VLMC’ version ‘1.3-12’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘VLMC’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
predict.vlmc: warning in abbreviate(nABC, min = 1): partial argument
match of 'min' to 'minlength'
prt.vvec: warning in formatC(v[i], w = 1): partial argument match of
'w' to 'width'
vlmc: warning in abbreviate(alphabet, min = 1): partial argument match
of 'min' to 'minlength'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'as.dendrogram.vlmc':
‘as.dendrogram.vlmc’
S3 methods shown with full name in documentation object 'deviance.vlmc':
‘deviance.vlmc’
S3 methods shown with full name in documentation object 'draw.vlmc':
‘draw.vlmc’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking examples ... [15s/19s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [33s/38s] OK
Running ‘AIC-etc.R’
Comparing ‘AIC-etc.Rout’ to ‘AIC-etc.Rout.save’ ... OK
Running ‘iid-cutoff.R’ [29s/33s]
Comparing ‘iid-cutoff.Rout’ to ‘iid-cutoff.Rout.save’ ...26c26
< buggy version of Kinderman-Ramage generator used
---
> Buggy version of Kinderman-Ramage generator used
Running ‘pred-vlmc.R’
Comparing ‘pred-vlmc.Rout’ to ‘pred-vlmc.Rout.save’ ... OK
- checking PDF version of manual ... OK
NOTE: There were 2 notes.
See
‘/home/ripley/R/packages/tests32/VLMC.Rcheck/00check.log’
for details.