- using R version 3.0.1 Patched (2013-05-18 r62762)
- using platform: sparc-sun-solaris2.10 (32-bit)
- using session charset: UTF-8
- checking for file ‘rpf/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘rpf’ version ‘0.8’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘rpf’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable compilation flags in Makevars ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [11s/11s] OK
Running ‘dotest.R’
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [27s/27s] OK
- checking re-building of vignette PDFs ... NOTE
Error in re-building vignettes:
...
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 834
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 838
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 842
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 860
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 873
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 890
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 895
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 897
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 924
Warning in t(.Call(rpf_logprob_wrapper, m@spec, param, theta)) :
rpf.logprob ignored NAs for person 927
make: Fatal error in reader: Makefile, line 2: Badly formed macro assignment
Current working directory /home/ripley/R/packages/tests32/rpf.Rcheck/vign_test/rpf/inst/doc
Error in buildVignettes(dir = "/home/ripley/R/packages/tests32/rpf.Rcheck/vign_test/rpf") :
running 'make' failed
Execution halted
- checking PDF version of manual ... OK
NOTE: There was 1 note.
See
‘/home/ripley/R/packages/tests32/rpf.Rcheck/00check.log’
for details.