Check results for 'rconifers'

using R version 2.15.0 Patched (2012-03-31 r58888)
using platform: sparc-sun-solaris2.10 (32-bit)
using session charset: UTF-8
checking for file ‘rconifers/DESCRIPTION’ ... OK
this is package ‘rconifers’ version ‘1.0.7’
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for .dll and .exe files ... OK
checking whether package ‘rconifers’ can be installed ... OK
checking installed package size ... OK
checking package directory ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... OK
checking Rd files ... OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... OK
checking data for ASCII and uncompressed saves ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking line endings in Makefiles ... OK
checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
checking compiled code ... OK
checking examples ... [20s/20s] OK
checking differences from ‘rconifers-Ex.Rout’ to ‘rconifers-Ex.Rout.save’ ...
0a1
> > options(pager = "console")
555,561c556,562
< 1 1 DF 2.08 0.61 7.08 0.845 1 100 4.4000 0
< 2 1 PP 4.80 2.91 11.50 0.852 1 100 7.5500 0
< 3 2 PP 2.43 1.10 6.28 0.705 1 100 3.7731 0
< 4 2 DF 1.06 0.00 3.88 0.794 1 100 2.9732 0
< 5 2 IC 0.60 0.00 1.70 0.706 1 100 1.1700 0
< 6 2 COCO 0.49 0.00 3.90 1.000 18 100 2.3601 0
< 7 2 IC 0.50 0.00 1.06 0.623 1 100 0.9800 0
---
> 1 1 DF 2.08 0.61 7.08 0.845 1 100.00 4.4000 0
> 2 1 PP 4.80 2.91 11.50 0.852 1 100.00 7.5500 0
> 3 2 WF 49.00 35.20 77.96 0.368 1 2.96 30.1527 0
> 4 2 PP 2.43 1.10 6.28 0.705 1 100.00 3.7731 0
> 5 2 COCO 0.49 0.00 3.90 1.000 18 100.00 2.3601 0
> 6 2 DF 1.06 0.00 3.88 0.794 1 100.00 2.9732 0
> 7 2 IC 0.60 0.00 1.70 0.706 1 100.00 1.1700 0
2291c2292
< max sdi = 400.9
---
> max sdi = 400.8
2293,2299c2294,2300
< CEIN 0.0000 8.962 0.0000 250.0 250.0
< COCO 0.0000 10.559 0.0000 825.0 825.0
< DF 3.3622 26.605 26.2029 425.0 425.0
< IC 0.8116 7.011 0.8981 250.0 500.0
< PM 5.1001 35.158 92.2132 650.0 650.0
< PP 10.3095 39.550 57.9700 100.0 100.0
< WF 2.1026 7.669 5.4433 225.7 275.7
---
> CEIN 0.000 8.830 0.000 250.0 250.0
> COCO 0.000 10.524 0.000 825.0 825.0
> DF 3.555 29.436 29.298 425.0 425.0
> IC 0.997 8.105 1.491 275.0 500.0
> PM 4.977 34.038 87.805 650.0 650.0
> PP 10.577 41.186 61.015 100.0 100.0
> WF 2.087 7.601 5.362 225.7 275.7
2309c2310
< max sdi = 400.9
---
> max sdi = 400.8
2311,2317c2312,2318
< CEIN 0.0000 8.962 0.0000 250.0 250.0
< COCO 0.0000 10.559 0.0000 825.0 825.0
< DF 3.3622 26.605 26.2029 425.0 425.0
< IC 0.8116 7.011 0.8981 250.0 500.0
< PM 5.1001 35.158 92.2132 650.0 650.0
< PP 10.3095 39.550 57.9700 100.0 100.0
< WF 2.1026 7.669 5.4433 225.7 275.7
---
> CEIN 0.000 8.830 0.000 250.0 250.0
> COCO 0.000 10.524 0.000 825.0 825.0
> DF 3.555 29.436 29.298 425.0 425.0
> IC 0.997 8.105 1.491 275.0 500.0
> PM 4.977 34.038 87.805 650.0 650.0
> PP 10.577 41.186 61.015 100.0 100.0
> WF 2.087 7.601 5.362 225.7 275.7
2754,2760c2755,2761
< CEIN 0.000 8.758 0.0000 250.0 250.0
< COCO 0.000 10.608 0.0000 825.0 825.0
< DF 3.098 27.270 22.2405 425.0 425.0
< IC 1.059 6.089 0.9168 150.0 500.0
< PM 5.024 33.938 89.4987 650.0 650.0
< PP 10.517 39.914 60.3291 100.0 100.0
< WF 2.530 5.336 5.2629 150.7 275.7
---
> CEIN 0.000 8.736 0.0000 250.0 250.0
> COCO 0.000 10.610 0.0000 825.0 825.0
> DF 3.123 27.847 22.6072 425.0 425.0
> IC 1.021 6.046 0.8536 150.0 500.0
> PM 5.019 33.925 89.3221 650.0 650.0
> PP 10.554 40.103 60.7530 100.0 100.0
> WF 2.529 5.417 5.2581 150.7 275.7
2774c2775
< max sdi = 392.5
---
> max sdi = 392.4
2776,2782c2777,2783
< CEIN 0.000 8.758 0.0000 250.00 250.00
< COCO 0.000 10.608 0.0000 825.00 825.00
< DF 5.982 41.304 9.9477 50.96 50.96
< IC 1.059 6.089 0.9168 150.00 500.00
< PM 5.024 33.938 89.4987 650.00 650.00
< PP 10.517 39.914 60.3291 100.00 100.00
< WF 2.530 5.336 5.2629 150.74 275.74
---
> CEIN 0.000 8.736 0.0000 250.00 250.00
> COCO 0.000 10.610 0.0000 825.00 825.00
> DF 6.029 41.907 10.1032 50.96 50.96
> IC 1.021 6.046 0.8536 150.00 500.00
> PM 5.019 33.925 89.3221 650.00 650.00
> PP 10.554 40.103 60.7530 100.00 100.00
> WF 2.529 5.417 5.2581 150.74 275.74
2794c2795
< max sdi = 389.8
---
> max sdi = 390
2796,2802c2797,2803
< CEIN 0.000 8.758 0.0000 250.000 250.000
< COCO 0.000 10.608 0.0000 825.000 825.000
< DF 6.141 43.000 3.1312 15.223 15.223
< IC 1.246 11.922 0.0652 7.694 11.764
< PM 4.869 33.777 2.0767 16.061 16.061
< PP 11.242 42.759 8.9133 12.931 12.931
< WF 3.772 6.485 0.3593 4.631 6.085
---
> CEIN 0.000 8.736 0.00000 250.000 250.000
> COCO 0.000 10.610 0.00000 825.000 825.000
> DF 6.203 43.671 3.19440 15.223 15.223
> IC 1.203 11.772 0.06071 7.694 11.764
> PM 4.841 33.714 2.05294 16.061 16.061
> PP 11.235 42.745 8.90282 12.931 12.931
> WF 3.773 6.689 0.35952 4.631 6.085
2814c2815
< max sdi = 380.6
---
> max sdi = 380.3
2816,2817c2817,2818
< CEIN 0.000 8.758 0.000 250.00 250.00
< COCO 0.000 10.608 0.000 825.00 825.00
---
> CEIN 0.00 8.736 0.000 250.00 250.00
> COCO 0.00 10.610 0.000 825.00 825.00
2820,2822c2821,2823
< PM 5.453 35.205 12.163 75.00 75.00
< PP 11.633 43.546 28.226 38.24 38.24
< WF 35.200 78.062 5.001 0.74 0.74
---
> PM 5.45 35.205 12.152 75.00 75.00
> PP 11.73 44.270 28.686 38.24 38.24
> WF 35.20 78.078 5.001 0.74 0.74
2837,2843c2838,2844
< CEIN 0.000 8.758 0.0000 250.0 250.0
< COCO 0.000 10.608 0.0000 825.0 825.0
< DF 3.098 27.270 22.2405 425.0 425.0
< IC 1.059 6.089 0.9168 150.0 500.0
< PM 5.222 34.681 16.7325 112.5 112.5
< PP 10.517 39.914 60.3291 100.0 100.0
< WF 2.530 5.336 5.2629 150.7 275.7
---
> CEIN 0.000 8.736 0.0000 250.0 250.0
> COCO 0.000 10.610 0.0000 825.0 825.0
> DF 3.123 27.847 22.6072 425.0 425.0
> IC 1.021 6.046 0.8536 150.0 500.0
> PM 5.205 34.645 16.6250 112.5 112.5
> PP 10.554 40.103 60.7530 100.0 100.0
> WF 2.529 5.417 5.2581 150.7 275.7
3318a3320
> unable to project, return_code = 1, 6.895566, check conifers.h for list of return codes
3326,3329c3328,3331
< n.years.projected = 20
< age = 23
< x0 = 6.891
< max sdi = 399
---
> n.years.projected = 19
> age = 22
> x0 = 6.896
> max sdi = 398.9
3331,3337c3333,3339
< CEIN 0.000 8.778 0.0000 250.00 250.00
< COCO 0.000 10.603 0.0000 825.00 825.00
< DF 3.164 27.955 22.5680 413.28 413.28
< IC 1.051 6.124 0.8783 145.86 486.22
< PM 5.018 33.920 86.7952 632.08 632.08
< PP 10.504 40.287 58.5187 97.24 97.24
< WF 2.525 5.360 5.0962 146.58 268.14
---
> CEIN 0.000 8.766 0.0000 250.0 250.0
> COCO 0.000 10.605 0.0000 825.0 825.0
> DF 3.156 28.050 23.0834 425.0 425.0
> IC 1.050 6.066 0.9017 150.0 500.0
> PM 5.021 33.929 89.3632 650.0 650.0
> PP 10.535 40.132 60.5358 100.0 100.0
> WF 2.531 5.470 5.2668 150.7 275.7
3348,3351c3350,3353
< n.years.projected = 20
< age = 23
< x0 = 6.891
< max sdi = 392.9
---
> n.years.projected = 19
> age = 22
> x0 = 6.896
> max sdi = 392.6
3353,3359c3355,3361
< CEIN 0.000 8.778 0.0000 250.00 250.00
< COCO 0.000 10.603 0.0000 825.00 825.00
< DF 6.101 42.635 10.3455 50.96 50.96
< IC 1.051 6.124 0.8783 145.86 486.22
< PM 5.018 33.920 86.7952 632.08 632.08
< PP 10.504 40.287 58.5187 97.24 97.24
< WF 2.525 5.360 5.0962 146.58 268.14
---
> CEIN 0.000 8.766 0.0000 250.00 250.00
> COCO 0.000 10.605 0.0000 825.00 825.00
> DF 6.088 42.485 10.3011 50.96 50.96
> IC 1.050 6.066 0.9017 150.00 500.00
> PM 5.021 33.929 89.3632 650.00 650.00
> PP 10.535 40.132 60.5358 100.00 100.00
> WF 2.531 5.470 5.2668 150.74 275.74
3369,3372c3371,3374
< n.years.projected = 20
< age = 23
< x0 = 6.891
< max sdi = 390.2
---
> n.years.projected = 19
> age = 22
> x0 = 6.896
> max sdi = 390
3374,3380c3376,3382
< CEIN 0.000 8.778 0.00000 250.000 250.000
< COCO 0.000 10.603 0.00000 825.000 825.000
< DF 6.252 44.233 3.24588 15.223 15.223
< IC 1.237 11.997 0.06424 7.694 11.764
< PM 4.832 33.687 2.04503 16.061 16.061
< PP 11.255 43.228 8.93429 12.931 12.931
< WF 3.770 6.466 0.35903 4.631 6.085
---
> CEIN 0.000 8.766 0.00000 250.000 250.000
> COCO 0.000 10.605 0.00000 825.000 825.000
> DF 6.221 43.902 3.21291 15.223 15.223
> IC 1.236 11.823 0.06413 7.694 11.764
> PM 4.848 33.731 2.05880 16.061 16.061
> PP 11.266 43.046 8.95181 12.931 12.931
> WF 3.777 6.977 0.36037 4.631 6.085
3390,3393c3392,3395
< n.years.projected = 20
< age = 23
< x0 = 6.891
< max sdi = 380.7
---
> n.years.projected = 19
> age = 22
> x0 = 6.896
> max sdi = 380.4
3395,3401c3397,3403
< CEIN 0.00 8.778 0.000 250.0000 250.0000
< COCO 0.00 10.603 0.000 825.0000 825.0000
< DF NaN NaN 0.000 0.0000 0.0000
< IC NaN NaN 0.000 0.0000 0.0000
< PM 5.45 35.205 11.481 70.8646 70.8646
< PP 11.70 44.223 26.980 36.1519 36.1519
< WF 35.20 78.063 4.863 0.7196 0.7196
---
> CEIN 0.000 8.766 0.000 250.00 250.00
> COCO 0.000 10.605 0.000 825.00 825.00
> DF NaN NaN 0.000 0.00 0.00
> IC NaN NaN 0.000 0.00 0.00
> PM 5.451 35.205 12.154 75.00 75.00
> PP 11.687 44.129 28.487 38.24 38.24
> WF 35.200 78.069 5.001 0.74 0.74
3410,3413c3412,3415
< n.years.projected = 20
< age = 23
< x0 = 6.891
< max sdi = 392.7
---
> n.years.projected = 19
> age = 22
> x0 = 6.896
> max sdi = 392.5
3415,3421c3417,3423
< CEIN 0.000 8.778 0.0000 250.00 250.00
< COCO 0.000 10.603 0.0000 825.00 825.00
< DF 3.164 27.955 22.5680 413.28 413.28
< IC 1.051 6.124 0.8783 145.86 486.22
< PM 5.200 34.630 16.5934 112.50 112.50
< PP 10.504 40.287 58.5187 97.24 97.24
< WF 2.525 5.360 5.0962 146.58 268.14
---
> CEIN 0.000 8.766 0.0000 250.0 250.0
> COCO 0.000 10.605 0.0000 825.0 825.0
> DF 3.156 28.050 23.0834 425.0 425.0
> IC 1.050 6.066 0.9017 150.0 500.0
> PM 5.209 34.655 16.6510 112.5 112.5
> PP 10.535 40.132 60.5358 100.0 100.0
> WF 2.531 5.470 5.2668 150.7 275.7
3426,3432c3428,3434
< CEIN 0.00000 0.00000 0.000 0.00 0.00
< COCO 0.00000 0.00000 0.000 0.00 0.00
< DF 0.00000 0.00000 0.000 0.00 0.00
< IC 0.00000 0.00000 0.000 0.00 0.00
< PM 0.18267 0.71008 -70.202 -519.58 -519.58
< PP 0.00000 0.00000 0.000 0.00 0.00
< WF 0.00000 0.00000 0.000 0.00 0.00
---
> CEIN 0.00000 0.00000 0.000 0.0 0.0
> COCO 0.00000 0.00000 0.000 0.0 0.0
> DF 0.00000 0.00000 0.000 0.0 0.0
> IC 0.00000 0.00000 0.000 0.0 0.0
> PM 0.18867 0.72659 -72.712 -537.5 -537.5
> PP 0.00000 0.00000 0.000 0.0 0.0
> WF 0.00000 0.00000 0.000 0.0 0.0
3989a3992
> unable to project, return_code = 1, 7.072470, check conifers.h for list of return codes
4533c4536
< max sdi = 398.8
---
> max sdi = 398.4
4535,4541c4538,4544
< CEIN 0.000 8.736 0.0000 250.0 250.0
< COCO 0.000 10.612 0.0000 825.0 825.0
< DF 3.167 28.316 23.2477 425.0 425.0
< IC 1.010 6.110 0.8347 150.0 500.0
< PM 5.022 33.931 89.4022 650.0 650.0
< PP 10.570 40.349 60.9364 100.0 100.0
< WF 2.531 5.398 5.2662 150.7 275.7
---
> CEIN 0.000 8.777 0.0000 250.0 250.0
> COCO 0.000 10.609 0.0000 825.0 825.0
> DF 3.146 27.708 22.9396 425.0 425.0
> IC 1.013 6.069 0.8401 150.0 500.0
> PM 5.018 33.923 89.2786 650.0 650.0
> PP 10.645 41.045 61.7992 100.0 100.0
> WF 2.531 5.464 5.2668 150.7 275.7
4561c4564
< max sdi = 392.5
---
> max sdi = 392.2
4563,4569c4566,4572
< CEIN 0.000 8.736 0.0000 250.00 250.00
< COCO 0.000 10.612 0.0000 825.00 825.00
< DF 6.103 42.815 10.3517 50.96 50.96
< IC 1.010 6.110 0.8347 150.00 500.00
< PM 5.022 33.931 89.4022 650.00 650.00
< PP 10.570 40.349 60.9364 100.00 100.00
< WF 2.531 5.398 5.2662 150.74 275.74
---
> CEIN 0.000 8.777 0.0000 250.00 250.00
> COCO 0.000 10.609 0.0000 825.00 825.00
> DF 6.085 42.687 10.2903 50.96 50.96
> IC 1.013 6.069 0.8401 150.00 500.00
> PM 5.018 33.923 89.2786 650.00 650.00
> PP 10.645 41.045 61.7992 100.00 100.00
> WF 2.531 5.464 5.2668 150.74 275.74
4581c4584
< max sdi = 390.1
---
> max sdi = 389.9
4583,4589c4586,4592
< CEIN 0.000 8.736 0.00000 250.000 250.000
< COCO 0.000 10.612 0.00000 825.000 825.000
< DF 6.249 44.412 3.24232 15.223 15.223
< IC 1.189 11.975 0.05937 7.694 11.764
< PM 4.852 33.743 2.06237 16.061 16.061
< PP 11.293 43.233 8.99419 12.931 12.931
< WF 3.771 6.446 0.35919 4.631 6.085
---
> CEIN 0.000 8.777 0.00000 250.000 250.000
> COCO 0.000 10.609 0.00000 825.000 825.000
> DF 6.243 44.336 3.23607 15.223 15.223
> IC 1.193 11.848 0.05975 7.694 11.764
> PM 4.836 33.701 2.04881 16.061 16.061
> PP 11.336 43.648 9.06281 12.931 12.931
> WF 3.777 6.995 0.36036 4.631 6.085
4601c4604
< max sdi = 380.4
---
> max sdi = 380.2
4603,4604c4606,4607
< CEIN 0.000 8.736 0.000 250.00 250.00
< COCO 0.000 10.612 0.000 825.00 825.00
---
> CEIN 0.000 8.777 0.000 250.00 250.00
> COCO 0.000 10.609 0.000 825.00 825.00
4607,4609c4610,4612
< PM 5.448 35.205 12.143 75.00 75.00
< PP 11.711 44.175 28.606 38.24 38.24
< WF 35.200 78.072 5.001 0.74 0.74
---
> PM 5.452 35.205 12.160 75.00 75.00
> PP 11.794 44.847 29.010 38.24 38.24
> WF 35.200 78.077 5.001 0.74 0.74
4621c4624
< max sdi = 392.4
---
> max sdi = 392
4623,4629c4626,4632
< CEIN 0.000 8.736 0.0000 250.0 250.0
< COCO 0.000 10.612 0.0000 825.0 825.0
< DF 3.167 28.316 23.2477 425.0 425.0
< IC 1.010 6.110 0.8347 150.0 500.0
< PM 5.210 34.662 16.6540 112.5 112.5
< PP 10.570 40.349 60.9364 100.0 100.0
< WF 2.531 5.398 5.2662 150.7 275.7
---
> CEIN 0.000 8.777 0.0000 250.0 250.0
> COCO 0.000 10.609 0.0000 825.0 825.0
> DF 3.146 27.708 22.9396 425.0 425.0
> IC 1.013 6.069 0.8401 150.0 500.0
> PM 5.204 34.638 16.6177 112.5 112.5
> PP 10.645 41.045 61.7992 100.0 100.0
> WF 2.531 5.464 5.2668 150.7 275.7
OK
checking PDF version of manual ... OK