• using R version 2.15.0 Patched (2012-03-31 r58888)
• using platform: sparc-sun-solaris2.10 (32-bit)
• using session charset: UTF-8
• checking for file ‘phylosim/DESCRIPTION’ ... OK
• this is package ‘phylosim’ version ‘0.17’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for .dll and .exe files ... OK
• checking whether package ‘phylosim’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [16m/16m] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [30m/29m] OK
• checking re-building of vignette PDFs ... NOTE
  Error in re-building vignettes:
  ...
  s/type1/public/amsfonts/cm/cmr17.pfb></usr/local/texlive/2011/texmf-dist/fonts/
  type1/public/amsfonts/cm/cmr5.pfb></usr/local/texlive/2011/texmf-dist/fonts/typ
  e1/public/amsfonts/cm/cmr7.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1/
  public/amsfonts/cm/cmsltt10.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1
  /public/amsfonts/cm/cmsy10.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1/
  public/amsfonts/cm/cmsy5.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1/pu
  blic/amsfonts/cm/cmsy7.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1/publ
  ic/amsfonts/cm/cmtt10.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1/publi
  c/amsfonts/cm/cmtt12.pfb></usr/local/texlive/2011/texmf-dist/fonts/type1/public
  /cm-super/sfrm1000.pfb>
  Output written on PhyloSim.pdf (42 pages, 569027 bytes).
  Transcript written on PhyloSim.log.
  rm PhyloSim.aux
  rm PhyloSim.log
  rm PhyloSim.toc
  rm PhyloSim.out
  rm PhyloSim.tex
  (rm *.eps; true)
  *.eps: No such file or directory
  *** Error code 2
  make: Fatal error: Command failed for target `all'
  Current working directory /home/ripley/R/packages/tests32/phylosim.Rcheck/vign_test/phylosim/inst/doc
  Error in buildVignettes(dir = "/home/ripley/R/packages/tests32/phylosim.Rcheck/vign_test/phylosim") :
  running 'make' failed
  Execution halted
  
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/home/ripley/R/packages/tests32/phylosim.Rcheck/00check.log’
  for details.