* installing to library ‘/home/ripley/R/Lib32’
* installing *source* package ‘mvabund’ ...
** package ‘mvabund’ successfully unpacked and MD5 sums checked
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for gsl_matrix_set in -lgsl... yes
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /usr/sfw/bin/ggrep
checking for egrep... /usr/sfw/bin/ggrep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking gsl/gsl_version.h usability... yes
checking gsl/gsl_version.h presence... yes
checking for gsl/gsl_version.h... yes
checking if GSL version >= 1.10... yes
checking for gsl-config... /usr/local/bin/gsl-config
checking for Rscript... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c RtoAnovaCpp.cpp -o RtoAnovaCpp.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c RtoGlm.cpp -o RtoGlm.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c RtoGlmAnova.cpp -o RtoGlmAnova.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c RtoGlmSmry.cpp -o RtoGlmSmry.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c RtoSmryCpp.cpp -o RtoSmryCpp.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c anova.cpp -o anova.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c calctest.cpp -o calctest.o
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c glm.cpp -o glm.o
"glm.cpp", line 513: Error: Overloading ambiguity between "std::sqrt(double)" and "std::sqrt(float)".
1 Error(s) detected.
*** Error code 2
make: Fatal error: Command failed for target `glm.o'
Current working directory /tmp/RtmpLZGWJM/R.INSTALL1def42632c8e/mvabund/src
CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG  -I/usr/local/include -I"/home/ripley/R/cc/library/stats/include"  -I/home/ripley/R/Lib32/Rcpp/include -KPIC  -O -features=tmplrefstatic -features=extensions  -c glm.cpp -o glm.o
"glm.cpp", line 513: Error: Overloading ambiguity between "std::sqrt(double)" and "std::sqrt(float)".
1 Error(s) detected.
*** Error code 2
make: Fatal error: Command failed for target `glm.o'
Current working directory /tmp/RtmpLZGWJM/R.INSTALL1def42632c8e/mvabund/src
ERROR: compilation failed for package ‘mvabund’
* removing ‘/home/ripley/R/Lib32/mvabund’

real     2:14.4
user     1:57.8
sys         8.1