• using R version 3.0.1 Patched (2013-05-18 r62762)
• using platform: sparc-sun-solaris2.10 (32-bit)
• using session charset: UTF-8
• checking for file ‘hyperSpec/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘hyperSpec’ version ‘0.98-20120923’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘hyperSpec’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  Warning: local assignments to syntactic functions: ~
  
  In addition to the above warning(s), found the following notes:
  
  Warning: local assignments to syntactic functions: ~
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [283s/283s] OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [15s/15s] OK
  Running ‘unittests.R’ [12s/12s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [362s/363s] OK
• checking re-building of vignette PDFs ... NOTE
  Error in re-building vignettes:
  ...
  Warning in hyperSpec:::.levelplot(x, data, ...) :
  Only first wavelength is used for plotting
  Loading required package: latticeExtra
  Loading required package: RColorBrewer
  
  Attaching package: ‘latticeExtra’
  
  The following object is masked from ‘package:ggplot2’:
  
  layer
  
  Loading required package: deldir
  deldir 0.0-22
  Warning in plotc(x, ...) : Intensity at first wavelengh only is used.
  Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
  'x' values are not equispaced; output may be wrong
  Warning in hyperSpec:::.levelplot(x, data, ...) :
  Only first wavelength is used for plotting
  'opts' is deprecated. Use 'theme' instead. (Deprecated; last used in version 0.9.1)
  'theme_blank' is deprecated. Use 'element_blank' instead. (Deprecated; last used in version 0.9.1)
  make: Fatal error in reader: Makefile, line 2: Unexpected end of line seen
  Current working directory /home/ripley/R/packages/tests32/hyperSpec.Rcheck/vign_test/hyperSpec/vignettes
  Error in buildVignettes(dir = "/home/ripley/R/packages/tests32/hyperSpec.Rcheck/vign_test/hyperSpec") :
  running 'make' failed
  Execution halted
  
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  ‘/home/ripley/R/packages/tests32/hyperSpec.Rcheck/00check.log’
  for details.