- using R version 3.0.1 Patched (2013-05-18 r62762)
- using platform: sparc-sun-solaris2.10 (32-bit)
- using session charset: UTF-8
- checking for file ‘diptest/DESCRIPTION’ ... OK
- this is package ‘diptest’ version ‘0.75-4’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘diptest’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... WARNING
Found an obsolete call in the following function:
‘rdRDS’
Found the defunct/removed function:
‘.readRDS’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... [16s/16s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [42s/42s] OK
Running ‘ex1.R’
Comparing ‘ex1.Rout’ to ‘ex1.Rout.save’ ...33c33,38
< G(2,2) --> ix = 1, iv = 2
---
> --> ix = 1, iv = 2
> calculating dip .. (dip_l, dip_u) = (1, 0)
> 'dip': LOOP-BEGIN: 2n*D= 1 [low,high] = [ 2, 5]; l_lcm/gcm = ( 3, 3)
> while(gcm[ix] != lcm[iv]) :
> L(3,2) --> ix = 2, iv = 3
> G(2,3) --> ix = 1, iv = 3
47,49c52,54
< --> ix = 1, iv = 3
< calculating dip .. (dip_l, dip_u) = (0, 1.33333) -> new larger dip 1.33333 (j_best = 3)
< 'dip': LOOP-BEGIN: 2n*D= 1.3333 [low,high] = [ 1, 2]; l_lcm/gcm = ( 2, 2)
---
> G(2,3) --> ix = 1, iv = 3
> calculating dip .. (dip_l, dip_u) = (1.33333, 0) -> new larger dip 1.33333 (j_best = 2)
> 'dip': LOOP-BEGIN: 2n*D= 1.3333 [low,high] = [ 3, 4]; l_lcm/gcm = ( 2, 2)
75c80
< $ lo.hi : int [1:2] 1 2
---
> $ lo.hi : int [1:2] 3 4
77,78c82,83
< $ gcm : int [1:2] 2 1
< $ lcm : int [1:2] 1 2
---
> $ gcm : int [1:2] 4 3
> $ lcm : int [1:2] 3 4
83,84c88,89
< $ xl : num 0
< $ xu : num 1
---
> $ xl : num 3
> $ xu : num 4
Running ‘mechler-ex.R’
Comparing ‘mechler-ex.Rout’ to ‘mechler-ex.Rout.save’ ... OK
Running ‘sim1.R’ [32s/32s]
Comparing ‘sim1.Rout’ to ‘sim1.Rout.save’ ... OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [36s/36s] OK
- checking re-building of vignette PDFs ... [39s/39s] OK
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
See
‘/home/ripley/R/packages/tests32/diptest.Rcheck/00check.log’
for details.