• using R version 3.0.1 Patched (2013-05-18 r62762)
  • using platform: sparc-sun-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • checking for file ‘diptest/DESCRIPTION’ ... OK
  • this is package ‘diptest’ version ‘0.75-4’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘diptest’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... WARNING
    Found an obsolete call in the following function:
    ‘rdRDS’
    Found the defunct/removed function:
    ‘.readRDS’
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... [16s/16s] OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... [42s/42s] OK
    Running ‘ex1.R’
    Comparing ‘ex1.Rout’ to ‘ex1.Rout.save’ ...33c33,38
    < G(2,2) --> ix = 1, iv = 2
    ---
    > --> ix = 1, iv = 2
    > calculating dip .. (dip_l, dip_u) = (1, 0)
    > 'dip': LOOP-BEGIN: 2n*D= 1 [low,high] = [ 2, 5]; l_lcm/gcm = ( 3, 3)
    > while(gcm[ix] != lcm[iv]) :
    > L(3,2) --> ix = 2, iv = 3
    > G(2,3) --> ix = 1, iv = 3
    47,49c52,54
    < --> ix = 1, iv = 3
    < calculating dip .. (dip_l, dip_u) = (0, 1.33333) -> new larger dip 1.33333 (j_best = 3)
    < 'dip': LOOP-BEGIN: 2n*D= 1.3333 [low,high] = [ 1, 2]; l_lcm/gcm = ( 2, 2)
    ---
    > G(2,3) --> ix = 1, iv = 3
    > calculating dip .. (dip_l, dip_u) = (1.33333, 0) -> new larger dip 1.33333 (j_best = 2)
    > 'dip': LOOP-BEGIN: 2n*D= 1.3333 [low,high] = [ 3, 4]; l_lcm/gcm = ( 2, 2)
    75c80
    < $ lo.hi : int [1:2] 1 2
    ---
    > $ lo.hi : int [1:2] 3 4
    77,78c82,83
    < $ gcm : int [1:2] 2 1
    < $ lcm : int [1:2] 1 2
    ---
    > $ gcm : int [1:2] 4 3
    > $ lcm : int [1:2] 3 4
    83,84c88,89
    < $ xl : num 0
    < $ xu : num 1
    ---
    > $ xl : num 3
    > $ xu : num 4
    Running ‘mechler-ex.R’
    Comparing ‘mechler-ex.Rout’ to ‘mechler-ex.Rout.save’ ... OK
    Running ‘sim1.R’ [32s/32s]
    Comparing ‘sim1.Rout’ to ‘sim1.Rout.save’ ... OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [36s/36s] OK
  • checking re-building of vignette PDFs ... [39s/39s] OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning.
    See
    ‘/home/ripley/R/packages/tests32/diptest.Rcheck/00check.log’
    for details.