• using R version 3.0.1 Patched (2013-05-18 r62762)
  • using platform: sparc-sun-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • checking for file ‘dbConnect/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘dbConnect’ version ‘1.0’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘dbConnect’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    DatabaseConnect : dlgConnect: warning in ggroup(horizontal = FALSE,
    cont = win): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in ggroup(vertical = TRUE,
    horizontal = FALSE, cont = g): partial argument match of 'cont' to
    'container'
    DatabaseConnect : dlgConnect: warning in ggroup(horizontal = TRUE, cont
    = connectionGroup): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in glabel(text = "Server Host: ",
    cont = serverGroup): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gedit(text =
    "headnode.stat.iastate.edu", editable = T, cont = serverGroup, width
    = 16): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in glabel(text = "Port: ", cont =
    serverGroup): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gedit(text = "3306", editable
    = T, cont = serverGroup, width = 8): partial argument match of 'cont'
    to 'container'
    DatabaseConnect : dlgConnect: warning in glabel(text = "Username: ",
    cont = userGroup): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gedit(text = "2009Expo",
    editable = T, width = 34, cont = userGroup): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in glabel(text = "Password: ",
    cont = pwdGroup): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gedit(text = "R R0cks",
    editable = T, width = 34, cont = pwdGroup): partial argument match of
    'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in glabel(text = "Database: ",
    cont = dbGroup): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gedit(text = "data_expo_2009",
    editable = T, width = 34, cont = dbGroup): partial argument match of
    'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in ggroup(horizontal = TRUE, cont
    = g): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gbutton("Connect", cont =
    buttonGroup, handler = function(h, ...) {: partial argument match of
    'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in library(RMySQL): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in .dbhistory <<-
    paste(.dbhistory, "library(RMySQL)", sep = "\n"): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in drv <- dbDriver("MySQL"):
    partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in .dbhistory <<-
    paste(.dbhistory, "drv <- dbDriver(\"MySQL\")", sep = "\n"): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in con <<- dbConnect(drv, user =
    svalue(user), password = svalue(pwd), port =
    as.numeric(svalue(port)), dbname = svalue(dbname), host =
    svalue(server)): partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in .dbhistory <<-
    paste(.dbhistory, "\ncon <- dbConnect(drv, user = \"", svalue(user),
    "\", password = \"", svalue(pwd), "\", port = ",
    as.numeric(svalue(port)), ", dbname = \"", svalue(dbname), "\", host
    = \"", svalue(server), "\")", sep = ""): partial argument match of
    'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in svalue(okButton) <-
    "Connected": partial argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in dispose(win): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in databaseViewer(con): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in }): partial argument match of
    'cont' to 'container'
    DatabaseConnect : dlgConnect: warning in gbutton("Close", cont =
    buttonGroup, handler = function(h, ...) {: partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = F,
    cont = win): partial argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = F,
    cont = win): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = T,
    cont = gg): partial argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = T,
    cont = gg): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in glabel("Save
    history to file?", cont = g1): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer : saveHist: warning in glabel("Save in
    directory:", cont = g2): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer : saveHist: warning in
    gedit(paste(getwd()), expand = T, cont = g2): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in glabel("Save
    as:", cont = g3): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in
    gedit("dbhistory.R", expand = T, cont = g3): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in gbutton("Save",
    handler = function(h, ...) {: partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer : saveHist: warning in cat(dbhist,
    file = paste(svalue(dirline), "/", svalue(saveline), sep = "")):
    partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in dispose(win):
    partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in }, cont = g4):
    partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : saveHist: warning in
    gbutton("Cancel", handler = function(h, ...) {: partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    mainWindow, expand = T): partial argument match of 'hor' to
    'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    mainWindow, expand = T): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer: warning in gnotebook(cont =
    mainGroup, expand = T): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$notebook, label = "Data Viewer", expand = T): partial
    argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$notebook, label = "Data Viewer", expand = T): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$notebook, label = "Variable Browser", expand = T): partial
    argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$notebook, label = "Variable Browser", expand = T): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$notebook, label = "Subsample", expand = T): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$notebook, label = "Subsample", expand = T): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$notebook, label = "Query", expand = T): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$notebook, label = "Query", expand = T): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gnotebook(cont =
    .db$main$nbList$line$group, expand = T): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$nbList$line$notebook, label = i, expand = T): partial
    argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$nbList$line$notebook, label = i, expand = T): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$line$nbList[[i]]$group, expand = F): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$line$nbList[[i]]$group, expand = F): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in glabel(tablename, cont =
    .db$main$nbList$line$nbList[[i]]$infogroup): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in glabel(tablerows, cont =
    .db$main$nbList$line$nbList[[i]]$infogroup): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gnotebook(cont =
    .db$main$nbList$variable$group, expand = T): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$nbList$variable$notebook, label = i, expand = T): partial
    argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
    .db$main$nbList$variable$notebook, label = i, expand = T): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$variable$nbList[[i]]$group, expand = F): partial
    argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$variable$nbList[[i]]$group, expand = F): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in glabel(tablename, cont =
    .db$main$nbList$variable$nbList[[i]]$infogroup): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in glabel(tablerows, cont =
    .db$main$nbList$variable$nbList[[i]]$infogroup): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gradio(.db$tables$usable,
    hor = F): partial argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in gframe("Tables", hor = F,
    expand = F, cont = .db$main$nbList$subsample$group): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in gframe("Tables", hor = F,
    expand = F, cont = .db$main$nbList$subsample$group): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
    F, cont = .db$main$nbList$subsample$group): partial argument match of
    'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
    F, cont = .db$main$nbList$subsample$group): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
    F, cont = .db$main$nbList$subsample$right$group): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
    F, cont = .db$main$nbList$subsample$right$group): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
    F, cont = .db$main$nbList$subsample$right$group): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
    F, cont = .db$main$nbList$subsample$right$group): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
    F, cont = .db$main$nbList$subsample$right$groupTop): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
    F, cont = .db$main$nbList$subsample$right$groupTop): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gbutton("Add Row", cont =
    .db$main$nbList$subsample$right$groupBottom): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gbutton("Remove Row", cont
    = .db$main$nbList$subsample$right$groupBottom): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gbutton("Reset to
    defaults", cont = .db$main$nbList$subsample$right$groupBottom):
    partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$subsample$right$groupBottom): partial argument match
    of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$subsample$right$groupBottom): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in glabel("Limit:", cont =
    .db$main$nbList$subsample$right$top$limitGroup): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gedit(.db$noLimit, cont =
    .db$main$nbList$subsample$right$top$limitGroup): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gbutton("Help", cont =
    .db$main$nbList$subsample$right$groupBottom): partial argument match
    of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gbutton("Execute Query",
    cont = .db$main$nbList$subsample$right$rows[[1]]$group): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in
    gcombobox(.db$fields[[.db$tables$usable[1]]], cont =
    .db$main$nbList$subsample$right$rows[[1]]$group): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in
    gcombobox(.db$compareOptions, cont =
    .db$main$nbList$subsample$right$rows[[1]]$group, width =
    .db$optionComboBoxWidth): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer: warning in gedit(.db$initialValue,
    cont = .db$main$nbList$subsample$right$rows[[1]]$group, expand = T):
    partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : addRowHandler: warning in ggroup(hor
    = T, expand = T, ): partial argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer : addRowHandler: warning in
    gradio(c("AND", "OR"), hor = T, cont =
    .db$main$nbList$subsample$right$rows[[i]]$group): partial argument
    match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer : addRowHandler: warning in
    gradio(c("AND", "OR"), hor = T, cont =
    .db$main$nbList$subsample$right$rows[[i]]$group): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : addRowHandler: warning in
    gcombobox(.db$fields[[currentTable]], cont =
    .db$main$nbList$subsample$right$rows[[i]]$group): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : addRowHandler: warning in
    gcombobox(.db$compareOptions, cont =
    .db$main$nbList$subsample$right$rows[[i]]$group, width =
    .db$optionComboBoxWidth): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer : addRowHandler: warning in
    gedit(.db$initialValue, cont =
    .db$main$nbList$subsample$right$rows[[i]]$group, expand = T): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(cont =
    window, hor = F): partial argument match of 'hor' to 'horizontal'
    DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(cont =
    window, hor = F): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
    F, expand = T, cont = group): partial argument match of 'hor' to
    'horizontal'
    DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
    F, expand = T, cont = group): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in
    gtext(strwrap(message, wrap), cont = top.group, expand = T, editable
    = F): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
    T, expand = F, cont = group): partial argument match of 'hor' to
    'horizontal'
    DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
    T, expand = F, cont = group): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in gbutton("ok",
    expand = T, handler = function(h, ...) {: partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in
    dispose(window): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer : helpDialog: warning in }, cont =
    bottom.group): partial argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$group): partial argument match of 'hor' to
    'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$group): partial argument match of 'cont' to
    'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$queryLine$group): partial argument match of
    'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$queryLine$group): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gbutton("Run following
    query:", cont = .db$main$nbList$query$queryLine$leftGroup, ): partial
    argument match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gedit(starttext, cont =
    .db$main$nbList$query$queryLine$group, expand = T): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$tabLine$group): partial argument match of 'hor'
    to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$tabLine$group): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in glabel("Tab Name: ", cont
    = .db$main$nbList$query$tabLine$leftGroup): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gedit("Tab", cont =
    .db$main$nbList$query$tabLine$group, expand = T): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$saveLine$group): partial argument match of
    'hor' to 'horizontal'
    DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
    .db$main$nbList$query$saveLine$group): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gcheckbox("Save in R? ",
    cont = .db$main$nbList$query$saveLine$leftGroup, ): partial argument
    match of 'cont' to 'container'
    DatabaseConnect : databaseViewer: warning in gnotebook(cont =
    .db$main$nbList$query$group, expand = T): partial argument match of
    'cont' to 'container'
    DatabaseConnect : databaseViewer : queryHandler: warning in
    gtable(as.data.frame(output), cont = .db$main$nbList$query$notebook,
    label = tabname): partial argument match of 'cont' to 'container'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... NONE
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/home/ripley/R/packages/tests32/dbConnect.Rcheck/00check.log’
    for details.