• using R version 3.0.1 Patched (2013-05-18 r62762)
  • using platform: sparc-sun-solaris2.10 (32-bit)
  • using session charset: UTF-8
  • using option ‘--no-vignettes’
  • checking for file ‘BMS/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘BMS’ version ‘0.3.1’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘BMS’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    .addup.enum: no visible binding for global variable ‘pmpold’
    .addup.enum: no visible binding for global variable ‘lprobold’
    .addup.enum: no visible binding for global variable ‘null.lik’
    .addup.enum: no visible binding for '<<-' assignment to ‘inccount’
    .addup.enum: no visible binding for global variable ‘inccount’
    .addup.enum: no visible binding for global variable ‘molddraw’
    .addup.enum: no visible binding for '<<-' assignment to ‘msize’
    .addup.enum: no visible binding for global variable ‘msize’
    .addup.enum: no visible binding for global variable ‘kold’
    .addup.enum: no visible binding for '<<-' assignment to ‘cumsumweights’
    .addup.enum: no visible binding for global variable ‘cumsumweights’
    .addup.enum: no visible binding for global variable ‘position’
    .addup.enum: no visible binding for global variable ‘K’
    .addup.enum: no visible binding for global variable ‘b1’
    .addup.enum: no visible binding for global variable ‘b2’
    .addup.enum: no visible binding for '<<-' assignment to ‘bmo’
    .addup.enum: no visible binding for global variable ‘bmo’
    .addup.enum: no visible binding for '<<-' assignment to ‘null.count’
    .addup.enum: no visible binding for global variable ‘null.count’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘pmpold’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘lprobold’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘null.lik’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘inccount’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘inccount’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘molddraw’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘msize’
    .addup.enum.wotherstats: no visible binding for global variable ‘msize’
    .addup.enum.wotherstats: no visible binding for global variable ‘kold’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘cumsumweights’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘cumsumweights’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘position’
    .addup.enum.wotherstats: no visible binding for global variable ‘K’
    .addup.enum.wotherstats: no visible binding for global variable ‘b1’
    .addup.enum.wotherstats: no visible binding for global variable ‘b2’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘bmo’
    .addup.enum.wotherstats: no visible binding for global variable ‘bmo’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘null.count’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘null.count’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘otherstats’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘lik.list’
    .addup.enum.wotherstats: no visible binding for '<<-' assignment to
    ‘add.otherstats’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘add.otherstats’
    .addup.enum.wotherstats: no visible binding for global variable
    ‘otherstats’
    .addup.mcmc: no visible binding for '<<-' assignment to ‘inccount’
    .addup.mcmc: no visible binding for global variable ‘inccount’
    .addup.mcmc: no visible binding for global variable ‘molddraw’
    .addup.mcmc: no visible binding for '<<-' assignment to ‘msize’
    .addup.mcmc: no visible binding for global variable ‘msize’
    .addup.mcmc: no visible binding for global variable ‘kold’
    .addup.mcmc: no visible binding for global variable ‘position’
    .addup.mcmc: no visible binding for global variable ‘K’
    .addup.mcmc: no visible binding for global variable ‘b1’
    .addup.mcmc: no visible binding for global variable ‘b2’
    .addup.mcmc: no visible binding for '<<-' assignment to ‘bmo’
    .addup.mcmc: no visible binding for global variable ‘bmo’
    .addup.mcmc: no visible binding for '<<-' assignment to ‘null.count’
    .addup.mcmc: no visible binding for global variable ‘null.count’
    .addup.mcmc.wotherstats: no visible binding for '<<-' assignment to
    ‘inccount’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘inccount’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘molddraw’
    .addup.mcmc.wotherstats: no visible binding for '<<-' assignment to
    ‘msize’
    .addup.mcmc.wotherstats: no visible binding for global variable ‘msize’
    .addup.mcmc.wotherstats: no visible binding for global variable ‘kold’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘position’
    .addup.mcmc.wotherstats: no visible binding for global variable ‘K’
    .addup.mcmc.wotherstats: no visible binding for global variable ‘b1’
    .addup.mcmc.wotherstats: no visible binding for global variable ‘b2’
    .addup.mcmc.wotherstats: no visible binding for '<<-' assignment to
    ‘bmo’
    .addup.mcmc.wotherstats: no visible binding for global variable ‘bmo’
    .addup.mcmc.wotherstats: no visible binding for '<<-' assignment to
    ‘null.count’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘null.count’
    .addup.mcmc.wotherstats: no visible binding for '<<-' assignment to
    ‘otherstats’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘lik.list’
    .addup.mcmc.wotherstats: no visible binding for '<<-' assignment to
    ‘add.otherstats’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘add.otherstats’
    .addup.mcmc.wotherstats: no visible binding for global variable
    ‘otherstats’
    pred.density : calc_alldens: no visible binding for '<<-' assignment to
    ‘xf_index’
    pred.density : calc_alldens : <anonymous>: no visible binding for
    global variable ‘xf_index’
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... [429s/429s] OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... SKIPPED
  • checking re-building of vignettes ... SKIPPED
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/home/ripley/R/packages/tests32/BMS.Rcheck/00check.log’
    for details.