- using R version 3.0.0 Patched (2013-04-03 r62485)
- using platform: sparc-sun-solaris2.10 (32-bit)
- using session charset: UTF-8
- checking for file ‘AlgDesign/DESCRIPTION’ ... OK
- this is package ‘AlgDesign’ version ‘1.1-7’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for .dll and .exe files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘AlgDesign’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
expand.formula : nameargs : <anonymous>: warning in deparse(x, width =
500): partial argument match of 'width' to 'width.cutoff'
expand.formula : quad: warning in gsub(ag, repl = nms[i], strg):
partial argument match of 'repl' to 'replacement'
expand.formula : cubic: warning in gsub(ag, repl = nms[i], strg):
partial argument match of 'repl' to 'replacement'
expand.formula : cubicS: warning in gsub(ag, repl = nms[i], strg):
partial argument match of 'repl' to 'replacement'
expand.formula: warning in deparse(frml, width = 500): partial argument
match of 'width' to 'width.cutoff'
optFederov: warning in expand.formula(frml, colnames(data), numeric =
numericColumn): partial argument match of 'numeric' to 'numerics'
optMonteCarlo : randNullify: warning in sort(apply(rc * rc, 1, sum),
dec = TRUE, ind = TRUE): partial argument match of 'dec' to
'decreasing'
optMonteCarlo : randNullify: warning in sort(diag(t(expcand) %*%
(expcand - expdes %*% qr.coef(aa, expcand))), dec = TRUE, ind =
TRUE): partial argument match of 'dec' to 'decreasing'
optMonteCarlo : getCenteredDesign: warning in sort(d, dec = TRUE, ind =
TRUE): partial argument match of 'dec' to 'decreasing'
optMonteCarlo : getCenteredDesign: warning in optFederov(frml, cand,
nTrials = nT, approximate = approximate, rows = rows, crit =
criterion, eval = evaluateI, space = space, DFrac = DFrac, CFrac =
CFrac): partial argument match of 'crit' to 'criterion'
optMonteCarlo : getCenteredDesign: warning in optFederov(frml, cand,
nTrials = nT, approximate = approximate, rows = rows, crit =
criterion, eval = evaluateI, space = space, DFrac = DFrac, CFrac =
CFrac): partial argument match of 'eval' to 'evaluateI'
optMonteCarlo: warning in deparse(frml, width = 500): partial argument
match of 'width' to 'width.cutoff'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'model.matrix.formula':
‘model.matrix.formula’
S3 methods shown with full name in documentation object 'model.matrix.terms':
‘model.matrix.terms’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... [30s/30s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... OK
- checking re-building of vignette PDFs ... OK
- checking PDF version of manual ... OK
NOTE: There were 2 notes.
See
‘/home/ripley/R/packages/tests32/AlgDesign.Rcheck/00check.log’
for details.