• using R version 2.7.0 Patched (2008-04-23 r45482)
• using session charset: ASCII
• checking for file 'sm/DESCRIPTION' ... OK
• this is package 'sm' version '2.2-2'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking whether package 'sm' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  addplot: no visible binding for '<<-' assignment to 'xyzcheck'
  addplot: no visible binding for '<<-' assignment to 'llong'
  addplot: no visible binding for global variable 'xyzcheck'
  addplot: no visible binding for '<<-' assignment to 'llat'
  addplot: no visible binding for global variable 'llat'
  addplot: no visible binding for '<<-' assignment to 'X'
  addplot: no visible binding for global variable 'llong'
  addplot: no visible binding for '<<-' assignment to 'Y'
  addplot: no visible binding for global variable 'X'
  addplot: no visible binding for global variable 'Y'
  britmap: no visible binding for global variable 'britpts'
  britmap: no visible binding for global variable 'britlat'
  britmap: no visible binding for global variable 'britlong'
  change: no visible binding for '<<-' assignment to 'theta'
  change: no visible binding for global variable 'theta'
  change: no visible binding for '<<-' assignment to 'phi'
  change: no visible binding for global variable 'phi'
  cv: no visible binding for global variable 'h.weights'
  h.select: no visible binding for global variable 'nbins'
  hcv: possible error in sm.weight2(x, x, exp(hgrid[i] * c(sqrt(var(x[,
  1])), sqrt(var(x[, 2])))), h.weights = h.weights, cross = TRUE):
  unused argument(s) (h.weights = h.weights)
  hidplot: no visible binding for '<<-' assignment to 'X'
  hidplot: no visible binding for '<<-' assignment to 'Y'
  hidplot: no visible binding for global variable 'X'
  hidplot: no visible binding for global variable 'Y'
  incphi: no visible binding for '<<-' assignment to 'phi'
  incphi: no visible binding for global variable 'phi'
  inctheta: no visible binding for '<<-' assignment to 'theta'
  inctheta: no visible binding for global variable 'theta'
  latlines: no visible binding for '<<-' assignment to 'xyzcheck'
  latlines: no visible binding for global variable 'xyzcheck'
  latlines.e: no visible binding for '<<-' assignment to 'xyzcheck'
  latlines.e: no visible binding for global variable 'xyzcheck'
  longlines: no visible binding for '<<-' assignment to 'xyzcheck'
  longlines: no visible binding for global variable 'xyzcheck'
  longlines.e: no visible binding for '<<-' assignment to 'xyzcheck'
  longlines.e: no visible binding for global variable 'xyzcheck'
  nise: no visible binding for global variable 'nbins'
  nise: no visible binding for global variable 'hmult'
  plot2: no visible binding for '<<-' assignment to 'xyzcheck'
  plot2: no visible binding for '<<-' assignment to 'long2'
  plot2: no visible binding for global variable 'xyzcheck'
  plot2: no visible binding for '<<-' assignment to 'lat2'
  plot2: no visible binding for global variable 'lat2'
  plot2: no visible binding for '<<-' assignment to 'X'
  plot2: no visible binding for global variable 'long2'
  plot2: no visible binding for '<<-' assignment to 'Y'
  plot2: no visible binding for global variable 'X'
  plot2: no visible binding for global variable 'Y'
  plot2d: no visible binding for '<<-' assignment to 'xyzcheck'
  plot2d: no visible binding for '<<-' assignment to 'llong'
  plot2d: no visible binding for global variable 'xyzcheck'
  plot2d: no visible binding for '<<-' assignment to 'llat'
  plot2d: no visible binding for '<<-' assignment to 'invislong'
  plot2d: no visible binding for '<<-' assignment to 'invislat'
  plot2d: no visible binding for global variable 'llat'
  plot2d: no visible binding for global variable 'invislong'
  plot2d: no visible binding for global variable 'invislat'
  plot2d: no visible binding for '<<-' assignment to 'X'
  plot2d: no visible binding for global variable 'llong'
  plot2d: no visible binding for '<<-' assignment to 'Y'
  plot2d: no visible binding for global variable 'X'
  plot2d: no visible binding for global variable 'Y'
  replot.density2: no visible binding for global variable 'smplot'
  replot.density3: no visible binding for global variable 'smplot'
  replot.smooth2: no visible binding for global variable 'smplot'
  rp.density1: no visible binding for global variable 'display'
  rp.density1: no visible binding for global variable 'se'
  rp.density1: no visible binding for global variable 'panel.plot'
  rp.density1: no visible binding for global variable 'method'
  rp.density1: no visible binding for global variable 'h.manual'
  rp.density2: no visible binding for global variable 'se'
  rp.density2: no visible binding for global variable 'test'
  rp.density2: no visible binding for global variable 'display'
  rp.density2: no visible binding for global variable 'panel.plot'
  rp.density2: no visible binding for global variable 'smplot'
  rp.density2: no visible binding for global variable 'method'
  rp.density2: no visible binding for global variable 'h.manual'
  rp.density2: no visible binding for global variable 'theta'
  rp.density2: no visible binding for global variable 'phi'
  rp.density3: no visible binding for global variable 'se'
  rp.density3: no visible binding for global variable 'test'
  rp.density3: no visible binding for global variable 'display'
  rp.density3: no visible binding for global variable 'smplot'
  rp.density3: no visible binding for global variable 'method'
  rp.density3: no visible binding for global variable 'h.manual'
  rp.smooth1: no visible binding for global variable 'se'
  rp.smooth1: no visible binding for global variable 'test'
  rp.smooth1: no visible binding for global variable 'panel.plot'
  rp.smooth1: no visible binding for global variable 'method'
  rp.smooth1: no visible binding for global variable 'h.manual'
  rp.smooth2: no visible binding for global variable 'se'
  rp.smooth2: no visible binding for global variable 'test'
  rp.smooth2: no visible binding for global variable 'display'
  rp.smooth2: no visible binding for global variable 'panel.plot'
  rp.smooth2: no visible binding for global variable 'smplot'
  rp.smooth2: no visible binding for global variable 'method'
  rp.smooth2: no visible binding for global variable 'h.manual'
  rp.smooth2: no visible binding for global variable 'theta'
  rp.smooth2: no visible binding for global variable 'phi'
  sig.trace: no visible binding for global variable 'display'
  sm.ancova: no visible binding for global variable 'nbins'
  sm.ancova: no visible binding for global variable 'band'
  sm.ancova: no visible binding for global variable 'display'
  sm.ancova: no visible binding for global variable 'ngrid'
  sm.ancova: no visible binding for global variable 'xlab'
  sm.ancova: no visible binding for global variable 'ylab'
  sm.ancova: no visible binding for global variable 'xlim'
  sm.ancova: no visible binding for global variable 'ylim'
  sm.binomial: no visible binding for global variable 'ngrid'
  sm.binomial: no visible binding for global variable 'ylim'
  sm.binomial: no visible binding for global variable 'nbins'
  sm.binomial: no visible binding for global variable 'eval.points'
  sm.binomial: no visible binding for global variable 'nobs'
  sm.binomial: no visible binding for global variable 'ndim'
  sm.binomial: no visible binding for global variable 'xlab'
  sm.binomial: no visible binding for global variable 'ylab'
  sm.density: no visible binding for global variable 'nbins'
  sm.density: no visible binding for global variable 'delta'
  sm.density: no visible binding for global variable 'xlab'
  sm.density: no visible binding for global variable 'ylab'
  sm.density: no visible binding for global variable 'zlab'
  sm.density.1d: no visible binding for global variable 'display'
  sm.density.1d: no visible binding for global variable 'col.band'
  sm.density.1d: no visible binding for global variable 'col.points'
  sm.density.1d: no visible binding for global variable 'ngrid'
  sm.density.1d: no visible binding for global variable 'h.weights'
  sm.density.1d: no visible binding for global variable 'xlim'
  sm.density.1d: no visible binding for global variable 'yht'
  sm.density.1d: no visible binding for global variable 'ylim'
  sm.density.2d: no visible binding for global variable 'ngrid'
  sm.density.2d: no visible binding for global variable 'xlab'
  sm.density.2d: no visible binding for global variable 'ylab'
  sm.density.2d: no visible binding for global variable 'zlab'
  sm.density.2d: no visible binding for global variable 'xlim'
  sm.density.2d: no visible binding for global variable 'ylim'
  sm.density.2d: no visible binding for global variable 'eval.points'
  sm.density.2d: no visible binding for global variable 'h.weights'
  sm.density.3d: no visible binding for global variable 'ngrid'
  sm.density.3d: no visible binding for global variable 'xlab'
  sm.density.3d: no visible binding for global variable 'ylab'
  sm.density.3d: no visible binding for global variable 'zlab'
  sm.density.3d: no visible binding for global variable 'xlim'
  sm.density.3d: no visible binding for global variable 'ylim'
  sm.density.3d: no visible binding for global variable 'zlim'
  sm.density.3d: no visible binding for global variable 'eval.points'
  sm.density.3d: no visible binding for global variable 'h.weights'
  sm.density.compare: no visible binding for global variable 'display'
  sm.density.compare: no visible binding for global variable 'xlab'
  sm.density.compare: no visible binding for global variable 'ylab'
  sm.density.eval.1d: no visible binding for global variable
  'eval.points'
  sm.density.eval.2d: no visible binding for global variable 'xlim'
  sm.density.eval.2d: no visible binding for global variable 'ylim'
  sm.density.eval.2d: no visible binding for global variable 'ngrid'
  sm.density.eval.3d: no visible binding for global variable 'xlim'
  sm.density.eval.3d: no visible binding for global variable 'ylim'
  sm.density.eval.3d: no visible binding for global variable 'zlim'
  sm.density.eval.3d: no visible binding for global variable 'ngrid'
  sm.density.positive.1d: no visible binding for global variable 'xlim'
  sm.density.positive.2d: no visible binding for global variable
  'eval.points'
  sm.density.positive.grid: no visible binding for global variable
  'delta'
  sm.discontinuity: no visible binding for global variable 'display'
  sm.discontinuity: no visible binding for global variable 'se'
  sm.discontinuity: no visible binding for global variable 'band'
  sm.discontinuity: no visible binding for global variable 'test'
  sm.discontinuity: no visible binding for global variable 'ngrid'
  sm.discontinuity: no visible binding for global variable 'xlab'
  sm.discontinuity: no visible binding for global variable 'ylab'
  sm.discontinuity: no visible binding for global variable 'xlim'
  sm.discontinuity: no visible binding for global variable 'ylim'
  sm.monotonicity: no visible binding for global variable 'xlab'
  sm.monotonicity: no visible binding for global variable 'ylab'
  sm.monotonicity: no visible binding for global variable 'xlim'
  sm.monotonicity: no visible binding for global variable 'ylim'
  sm.poisson: no visible binding for global variable 'ngrid'
  sm.poisson: no visible binding for global variable 'ylim'
  sm.poisson: no visible binding for global variable 'pch'
  sm.poisson: no visible binding for global variable 'nbins'
  sm.poisson: no visible binding for global variable 'xlab'
  sm.poisson: no visible binding for global variable 'ylab'
  sm.poisson: no visible binding for global variable 'eval.points'
  sm.regression: no visible binding for global variable 'nbins'
  sm.regression: no visible binding for global variable 'test'
  sm.regression: no visible binding for global variable 'h.weights'
  sm.regression: no visible binding for global variable 'xlab'
  sm.regression: no visible binding for global variable 'ylab'
  sm.regression: no visible binding for global variable 'ngrid'
  sm.regression: no visible binding for global variable 'cex'
  sm.regression: no visible binding for global variable 'zlab'
  sm.regression.1d: no visible binding for global variable 'ngrid'
  sm.regression.1d: no visible binding for global variable 'xlim'
  sm.regression.1d: no visible binding for global variable 'ylim'
  sm.regression.1d: no visible binding for global variable 'display'
  sm.regression.1d: no visible binding for global variable 'col.band'
  sm.regression.1d: no visible binding for global variable 'col.points'
  sm.regression.1d: no visible binding for global variable 'se'
  sm.regression.2d: no visible binding for global variable 'h.weights'
  sm.regression.2d: no visible binding for global variable 'display'
  sm.regression.2d: no visible binding for global variable 'band'
  sm.regression.2d: no visible binding for global variable 'xlim'
  sm.regression.2d: no visible binding for global variable 'zlim'
  sm.regression.2d: no visible binding for global variable 'eval.points'
  sm.regression.2d: no visible binding for global variable 'ylim'
  sm.regression.autocor: no visible binding for global variable 'display'
  sm.sigma: no visible binding for global variable 'nbins'
  sm.sigma2: possible error in chull(x1, x2, onbdy = TRUE): unused
  argument(s) (onbdy = TRUE)
  sm.sigma2: no visible global function definition for 'sm.weight2.nn'
  sm.sphere: no visible binding for global variable 'lat2'
  sm.sphere: no visible binding for global variable 'long2'
  sm.survival: no visible binding for global variable 'display'
  sm.survival: no visible binding for global variable 'ngrid'
  sm.survival: no visible binding for global variable 'xlab'
  sm.survival: no visible binding for global variable 'ylab'
  sm.variogram: no visible binding for global variable 'display'
  sm.variogram: no visible binding for global variable 'ngrid'
  sm.variogram: no visible binding for global variable 'band'
  sm.variogram: no visible binding for global variable 'test'
  sm.variogram: no visible binding for global variable 'nbins'
  sm.variogram: no visible binding for global variable 'eval.points'
  sm.variogram: no visible binding for global variable 'xlab'
  sm.variogram: no visible binding for global variable 'ylab'
  sm.variogram: no visible binding for global variable 'xlim'
  sm.variogram: no visible binding for global variable 'ylim'
  sphimage: no visible binding for '<<-' assignment to 'fmat'
  sphimage: no visible binding for global variable 'fmat'
• checking Rd files ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• creating sm-Ex.R ... OK
• checking examples ... OK
• checking tests ... ERROR
  Running the tests in 'tests/test_scripts.R' failed.
  Last 13 lines of output:
  > e <- residuals(lsfit(X,Yield,intercept=FALSE))
  
  > Position <- 1:36
  
  > par(mfrow=c(1,2))
  
  > sig.trace(sm.regression(Position, e, design.mat=X, model =
  + "no.effect", display="none"), hvec = seq(1, 20, by=1.5))
  Error in min(x, na.rm = na.rm) : invalid 'type' (list) of argument
  Calls: source ... sm.regression.1d -> replace.na -> eval -> eval -> range
  In addition: Warning message:
  In any(diff(lags)) : coercing argument of type 'double' to logical
  Execution halted
• elapsed time (check, wall clock): 3:22