• using R version 2.7.0 Patched (2008-05-04 r45620)
  • using session charset: ASCII
  • checking for file 'VR/DESCRIPTION' ... OK
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  • looks like 'VR' is a package bundle
  • this is bundle 'VR' version '7.2-42'
  • checking package dependencies ... OK
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  • checking if this is a source bundle ... OK
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  • checking whether bundle 'VR' can be installed ... OK
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  • checking 'MASS' in bundle 'VR'
    • checking package directory ... OK
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    • checking for portable file names ... OK
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    • checking for sufficient/correct file permissions ... OK
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    • checking for file 'DESCRIPTION.in' ... OK
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    • checking DESCRIPTION meta-information ... OK
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    • checking top-level files ... OK
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    • checking index information ... OK
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    • checking package subdirectories ... OK
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    • checking R files for non-ASCII characters ... OK
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    • checking R files for syntax errors ... OK
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    • checking whether the package can be loaded ... OK
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    • checking whether the package can be loaded with stated dependencies ... OK
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    • checking whether the name space can be loaded with stated dependencies ... OK
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    • checking for unstated dependencies in R code ... OK
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    • checking S3 generic/method consistency ... OK
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    • checking replacement functions ... OK
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    • checking foreign function calls ... OK
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    • checking R code for possible problems ... NOTE
      glmmPQL: no visible binding for global variable 'wts'
      neg.bin : variance: no visible binding for global variable '.Theta'
      neg.bin : dev.resids: no visible binding for global variable '.Theta'
      neg.bin : aic: no visible binding for global variable '.Theta'
      negative.binomial : variance: no visible binding for global variable
      '.Theta'
      negative.binomial : dev.resids: no visible binding for global variable
      '.Theta'
      negative.binomial : aic: no visible binding for global variable
      '.Theta'
    • checking Rd files ... OK
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    • checking Rd cross-references ... OK
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    • checking for missing documentation entries ... OK
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    • checking for code/documentation mismatches ... OK
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    • checking Rd \usage sections ... OK
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    • checking data for non-ASCII characters ... OK
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    • checking line endings in C/C++/Fortran sources/headers ... OK
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    • checking line endings in Makefiles ... OK
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    • checking for portable use of $BLAS_LIBS ... OK
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    • creating MASS-Ex.R ... OK
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    • checking examples ... OK
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    • checking tests ... OK
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    • creating MASS-manual.tex ... OK
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    • checking MASS-manual.tex using pdflatex ... OK
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  • checking 'class' in bundle 'VR'
    • checking package directory ... OK
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    • checking for portable file names ... OK
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    • checking for sufficient/correct file permissions ... OK
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    • checking for file 'DESCRIPTION.in' ... OK
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    • checking DESCRIPTION meta-information ... OK
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    • checking top-level files ... OK
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    • checking index information ... OK
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    • checking package subdirectories ... OK
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    • checking R files for non-ASCII characters ... OK
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    • checking R files for syntax errors ... OK
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    • checking whether the package can be loaded ... OK
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    • checking whether the package can be loaded with stated dependencies ... OK
      •
    • checking whether the name space can be loaded with stated dependencies ... OK
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    • checking for unstated dependencies in R code ... OK
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    • checking S3 generic/method consistency ... OK
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    • checking replacement functions ... OK
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    • checking foreign function calls ... OK
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    • checking R code for possible problems ... OK
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    • checking Rd files ... OK
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    • checking Rd cross-references ... OK
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    • checking for missing documentation entries ... OK
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    • checking for code/documentation mismatches ... OK
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    • checking Rd \usage sections ... OK
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    • checking line endings in C/C++/Fortran sources/headers ... OK
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    • checking line endings in Makefiles ... OK
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    • checking for portable use of $BLAS_LIBS ... OK
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    • creating class-Ex.R ... OK
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    • checking examples ... OK
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    • creating class-manual.tex ... OK
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    • checking class-manual.tex using pdflatex ... OK
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  • checking 'nnet' in bundle 'VR'
    • checking package directory ... OK
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    • checking for portable file names ... OK
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    • checking for sufficient/correct file permissions ... OK
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    • checking for file 'DESCRIPTION.in' ... OK
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    • checking DESCRIPTION meta-information ... OK
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    • checking top-level files ... OK
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    • checking index information ... OK
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    • checking package subdirectories ... OK
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    • checking R files for non-ASCII characters ... OK
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    • checking R files for syntax errors ... OK
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    • checking whether the package can be loaded ... OK
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    • checking whether the package can be loaded with stated dependencies ... OK
      •
    • checking whether the name space can be loaded with stated dependencies ... OK
      •
    • checking for unstated dependencies in R code ... OK
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    • checking S3 generic/method consistency ... OK
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    • checking replacement functions ... OK
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    • checking foreign function calls ... OK
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    • checking R code for possible problems ... OK
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    • checking Rd files ... OK
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    • checking Rd cross-references ... OK
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    • checking for missing documentation entries ... OK
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    • checking for code/documentation mismatches ... OK
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    • checking Rd \usage sections ... OK
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    • checking line endings in C/C++/Fortran sources/headers ... OK
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    • checking line endings in Makefiles ... OK
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    • checking for portable use of $BLAS_LIBS ... OK
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    • creating nnet-Ex.R ... OK
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    • checking examples ... OK
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    • creating nnet-manual.tex ... OK
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    • checking nnet-manual.tex using pdflatex ... OK
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  • checking 'spatial' in bundle 'VR'
    • checking package directory ... OK
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    • checking for portable file names ... OK
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    • checking for sufficient/correct file permissions ... OK
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    • checking for file 'DESCRIPTION.in' ... OK
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    • checking DESCRIPTION meta-information ... OK
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    • checking top-level files ... OK
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    • checking index information ... OK
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    • checking package subdirectories ... OK
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    • checking R files for non-ASCII characters ... OK
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    • checking R files for syntax errors ... OK
      •
    • checking whether the package can be loaded ... OK
      •
    • checking whether the package can be loaded with stated dependencies ... OK
      •
    • checking whether the name space can be loaded with stated dependencies ... OK
      •
    • checking for unstated dependencies in R code ... OK
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    • checking S3 generic/method consistency ... OK
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    • checking replacement functions ... OK
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    • checking foreign function calls ... OK
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    • checking R code for possible problems ... OK
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    • checking Rd files ... OK
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    • checking Rd cross-references ... OK
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    • checking for missing documentation entries ... OK
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    • checking for code/documentation mismatches ... OK
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    • checking Rd \usage sections ... OK
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    • checking line endings in C/C++/Fortran sources/headers ... OK
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    • checking line endings in Makefiles ... OK
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    • checking for portable use of $BLAS_LIBS ... OK
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    • creating spatial-Ex.R ... OK
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    • checking examples ... OK
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    • creating spatial-manual.tex ... OK
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    • checking spatial-manual.tex using pdflatex ... OK
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