• using R version 2.8.0 beta (2008-10-08 r46670)
  • using session charset: ASCII
  • checking for file 'Umacs/DESCRIPTION' ... OK
    •
  • this is package 'Umacs' version '0.924'
  • checking package name space information ... OK
    •
  • checking package dependencies ... OK
    •
  • checking if this is a source package ... OK
    •
  • checking for executable files ... OK
    •
  • checking whether package 'Umacs' can be installed ... OK
    •
  • checking package directory ... OK
    •
  • checking for portable file names ... OK
    •
  • checking for sufficient/correct file permissions ... OK
    •
  • checking DESCRIPTION meta-information ... OK
    •
  • checking top-level files ... OK
    •
  • checking index information ... OK
    •
  • checking package subdirectories ... OK
    •
  • checking R files for non-ASCII characters ... OK
    •
  • checking R files for syntax errors ... OK
    •
  • checking whether the package can be loaded ... OK
    •
  • checking whether the package can be loaded with stated dependencies ... OK
    •
  • checking whether the name space can be loaded with stated dependencies ... OK
    •
  • checking for unstated dependencies in R code ... OK
    •
  • checking S3 generic/method consistency ... OK
    •
  • checking replacement functions ... OK
    •
  • checking foreign function calls ... OK
    •
  • checking R code for possible problems ... NOTE
    .adaptPlot: no visible binding for '<<-' assignment to 'en'
    .adaptPlot: no visible binding for global variable 'x'
    .adaptPlot: no visible binding for '<<-' assignment to 'lm1'
    .adaptPlot: no visible binding for '<<-' assignment to 'b1'
    .adaptPlot: no visible binding for global variable 'lm1'
    .adaptPlot: no visible binding for global variable 'b1'
    .adaptPlot: no visible binding for '<<-' assignment to 'b2'
    .adaptPlot: no visible binding for global variable 'b2'
    .adaptPlot: no visible binding for '<<-' assignment to 'fp'
    .adaptPlot: no visible binding for '<<-' assignment to 'lm2'
    .adaptPlot: no visible binding for global variable 'lm2'
    .compute.eigen: no visible global function definition for 'error'
    .fundef: no visible binding for global variable 'FUN'
    .make.sampler.Sampler : make.chainsampler: no visible binding for
    global variable 'tpl.fun.make.chainsampler'
    .make.sampler.Sampler: no visible binding for global variable
    'tpl.init.sampler'
    .make.sampler.Sampler: no visible binding for global variable
    'tpl.init.trace'
    .make.sampler.Sampler : .sampler: no visible binding for global
    variable 'TITLE'
    .make.sampler.Sampler : .sampler: no visible binding for global
    variable 'tpl.end.sampler'
    .make.sampler.Sampler : .sampler: no visible binding for global
    variable 'DATE'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.adapt.Metropolis: no visible binding for '<<-' assignment to
    'Sigma.scale'
    .tpl.adapt.Metropolis: no visible global function definition for
    'scaleAdapt'
    .tpl.adapt.Metropolis: no visible binding for global variable 'PARAM'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'avg.p.jump'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'Sigma.scale'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'old.avg.p.jumps'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'old.scales'
    .tpl.adapt.Metropolis: no visible global function definition for
    'ifdebug'
    .tpl.adapt.Metropolis: no visible binding for global variable 'QPARAM'
    .tpl.adapt.Metropolis: no visible binding for global variable 'jumps'
    .tpl.adapt.Metropolis: no visible binding for '<<-' assignment to
    'Sigma.shape'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'Sigma.shape'
    .tpl.adapt.Metropolis: no visible binding for '<<-' assignment to
    'Sigma.jump'
    .tpl.adapt.Metropolis: no visible binding for '<<-' assignment to
    'Sigma.jump.eigen'
    .tpl.adapt.Metropolis: no visible binding for global variable
    'Sigma.jump'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.adapt.PMetropolis: no visible binding for '<<-' assignment to
    'Sigma.scale'
    .tpl.adapt.PMetropolis: no visible global function definition for
    'scaleAdapt'
    .tpl.adapt.PMetropolis: no visible binding for global variable 'PARAM'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'avg.p.jump'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'Sigma.scale'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'old.avg.p.jumps'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'old.scales'
    .tpl.adapt.PMetropolis: no visible global function definition for
    'ifdebug'
    .tpl.adapt.PMetropolis: no visible binding for global variable 'QPARAM'
    .tpl.adapt.PMetropolis: no visible binding for global variable 'jumps'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'dimension'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'n.jumps'
    .tpl.adapt.PMetropolis: no visible binding for global variable 'vec'
    .tpl.adapt.PMetropolis: no visible binding for '<<-' assignment to
    'Sigma.jump'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'Sigma.jump'
    .tpl.adapt.PMetropolis: no visible binding for '<<-' assignment to
    'Sigma.jump.eigen'
    .tpl.adapt.PMetropolis: no visible binding for global variable
    'Sigma.jump.eigen'
    .tpl.adapt.PSMetropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.adapt.PSMetropolis: no visible binding for '<<-' assignment to
    'Sigma.scale'
    .tpl.adapt.PSMetropolis: no visible global function definition for
    'scaleAdapt'
    .tpl.adapt.PSMetropolis: no visible binding for global variable 'PARAM'
    .tpl.adapt.PSMetropolis: no visible binding for global variable
    'avg.p.jump'
    .tpl.adapt.PSMetropolis: no visible binding for global variable
    'Sigma.scale'
    .tpl.adapt.PSMetropolis: no visible binding for global variable
    'old.avg.p.jumps'
    .tpl.adapt.PSMetropolis: no visible binding for global variable
    'old.scales'
    .tpl.adapt.PSMetropolis: no visible global function definition for
    'ifdebug'
    .tpl.adapt.PSMetropolis: no visible binding for global variable
    'QPARAM'
    .tpl.adapt.SMetropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.adapt.SMetropolis: no visible binding for '<<-' assignment to
    'Sigma.scale'
    .tpl.adapt.SMetropolis: no visible global function definition for
    'scaleAdapt'
    .tpl.adapt.SMetropolis: no visible binding for global variable 'PARAM'
    .tpl.adapt.SMetropolis: no visible binding for global variable
    'avg.p.jump'
    .tpl.adapt.SMetropolis: no visible binding for global variable
    'Sigma.scale'
    .tpl.adapt.SMetropolis: no visible binding for global variable
    'old.avg.p.jumps'
    .tpl.adapt.SMetropolis: no visible binding for global variable
    'old.scales'
    .tpl.adaptation.Metropolis: no visible binding for '<<-' assignment to
    'jumps'
    .tpl.adaptation.Metropolis: no visible binding for global variable
    'jumps'
    .tpl.adaptation.Metropolis: no visible binding for global variable
    'PARAM'
    .tpl.adaptation.Metropolis: no visible binding for global variable
    'adapt.now'
    .tpl.adaptation.Metropolis: no visible global function definition for
    'adapt'
    .tpl.adaptation.PMetropolis: no visible binding for '<<-' assignment to
    'jumps'
    .tpl.adaptation.PMetropolis: no visible binding for global variable
    'BYCOL'
    .tpl.adaptation.PMetropolis: no visible binding for global variable
    'jumps'
    .tpl.adaptation.PMetropolis: no visible binding for global variable
    'PARAM'
    .tpl.adaptation.PMetropolis: no visible binding for global variable
    'adapt.now'
    .tpl.adaptation.PMetropolis: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.adaptation.PMetropolis: no visible global function definition for
    'adapt'
    .tpl.adaptation.PSMetropolis: no visible binding for global variable
    'adapt.now'
    .tpl.adaptation.PSMetropolis: no visible global function definition for
    'adapt'
    .tpl.adaptation.SMetropolis: no visible binding for global variable
    'adapt.now'
    .tpl.adaptation.SMetropolis: no visible global function definition for
    'adapt'
    .tpl.altReject.Metropolis: no visible binding for global variable
    'PARAM'
    .tpl.altReject.Metropolis: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.altReject.Metropolis: no visible global function definition for
    'proposal'
    .tpl.altReject.Metropolis: no visible global function definition for
    '.logpost'
    .tpl.altReject.Metropolis: no visible binding for global variable
    'logpost.old'
    .tpl.altReject.Metropolis: no visible binding for '<<-' assignment to
    'logpost.old'
    .tpl.end.sampler.SamplerCheck: no visible binding for global variable
    'errors'
    .tpl.fun.make.chainsampler.Sampler: no visible binding for global
    variable 'tpl.init.local'
    .tpl.fun.make.chainsampler.Sampler: no visible binding for global
    variable 'tpl.init.initfun'
    .tpl.fun.make.chainsampler.Sampler: no visible binding for global
    variable 'tpl.init.chain'
    .tpl.fun.make.chainsampler.Sampler : .setenv: no visible binding for
    global variable 'tpl.set.env'
    .tpl.fun.make.chainsampler.Sampler : .refresh: no visible binding for
    global variable 'chain'
    .tpl.fun.make.chainsampler.Sampler : .get.col.names: no visible binding
    for global variable 'tpl.get.names'
    .tpl.fun.make.chainsampler.Sampler : .get.col.names: no visible binding
    for global variable 'ALL.PARAMS'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'chain'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'tpl.init.param'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'tpl.init.updater'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'ALL.PARAMS'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible global
    function definition for 'ifdebug'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'tpl.start.chain'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'n.burnin'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'adaptNow'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'n.thin'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'n.trace.interval'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'tpl.update.param'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'save.all'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'last.iteration'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for '<<-' assignment to 'last.iteration'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable 'tpl.end.chain'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for global variable '.Umacs.timer'
    .tpl.fun.make.chainsampler.Sampler : <anonymous>: no visible binding
    for '<<-' assignment to '.Umacs.timer'
    .tpl.get.names.Parameter: no visible binding for global variable
    'QSTEM'
    .tpl.init.Sigma.Metropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.init.Sigma.Metropolis: no visible binding for global variable
    'code.Sigma.scale'
    .tpl.init.Sigma.Metropolis: no visible binding for global variable
    'len'
    .tpl.init.Sigma.PMetropolis: no visible binding for global variable
    'PARAM'
    .tpl.init.Sigma.PMetropolis: no visible binding for global variable
    'BYCOL'
    .tpl.init.Sigma.PMetropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.init.Sigma.PMetropolis: no visible binding for global variable
    'code.Sigma.scale'
    .tpl.init.Sigma.PSMetropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.init.Sigma.PSMetropolis: no visible binding for global variable
    'code.Sigma.scale'
    .tpl.init.Sigma.PSMetropolis: no visible binding for global variable
    'len'
    .tpl.init.Sigma.SMetropolis: no visible binding for global variable
    'code.Sigma.scale.specified'
    .tpl.init.Sigma.SMetropolis: no visible binding for global variable
    'code.Sigma.scale'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN: no visible binding for
    global variable 'exists.code.logpost'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : .logpost: no visible
    binding for global variable 'code.logpost'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : proposal: no visible
    binding for global variable 'tpl.proposal'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : adapt: no visible binding
    for global variable 'tpl.adapt'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN: no visible binding for
    global variable 'PARAM'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN: no visible binding for
    global variable 'tpl.init.Sigma'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : <anonymous>: no visible
    binding for global variable 'tpl.reject'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : <anonymous>: no visible
    binding for global variable 'adapting'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : <anonymous>: no visible
    binding for global variable 'this.jump.prob'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : <anonymous>: no visible
    binding for global variable 'Sigma.scale'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : <anonymous>: no visible
    binding for global variable 'tpl.adaptation'
    .tpl.init.chain.Metropolis : MAKEUPDATEFUN : <anonymous>: no visible
    binding for global variable 'adapt.now'
    .tpl.init.chain.RawCode: no visible binding for global variable
    'code.init.chain'
    .tpl.init.initfun.Data: no visible binding for global variable 'PARAM'
    .tpl.init.initfun.FData : INITFUN: no visible binding for global
    variable 'CODEINIT'
    .tpl.init.initfun.FData: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.init.initfun.FData: no visible binding for global variable 'PARAM'
    .tpl.init.initfun.RawCode : INITFUN: no visible binding for global
    variable 'code.init.param'
    .tpl.init.initfun.SamplingScheme : INITFUN: no visible binding for
    global variable 'CODEINIT'
    .tpl.init.local.LocalFunction: no visible binding for global variable
    'FUNDEF'
    .tpl.init.local.SamplingScheme: no visible binding for global variable
    'IMPUTING'
    .tpl.init.local.SamplingScheme: no visible binding for global variable
    'QSTEM'
    .tpl.init.local.SamplingScheme: no visible global function definition
    for 'ifdebug'
    .tpl.init.param.FData: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.init.param.FData: no visible global function definition for
    'INITFUN'
    .tpl.init.param.RawCode: no visible global function definition for
    'INITFUN'
    .tpl.init.param.SamplingScheme: no visible binding for '<<-' assignment
    to 'PARAM'
    .tpl.init.param.SamplingScheme: no visible global function definition
    for 'INITFUN'
    .tpl.init.param.check.DFunction: no visible binding for '<<-'
    assignment to 'PARAM'
    .tpl.init.param.check.DFunction: no visible global function definition
    for 'UPDATEFUN'
    .tpl.init.param.check.Data: no visible global function definition for
    'whisper'
    .tpl.init.param.check.Data: no visible binding for global variable
    'QPARAM'
    .tpl.init.param.check.Data: no visible binding for global variable
    'PARAM'
    .tpl.init.param.check.Data: no visible binding for global variable
    'MISSING'
    .tpl.init.param.check.FData: no visible binding for '<<-' assignment to
    '.error'
    .tpl.init.param.check.FData: no visible global function definition for
    'whisper'
    .tpl.init.param.check.FData: no visible binding for global variable
    'QPARAM'
    .tpl.init.param.check.FData: no visible binding for global variable
    'IMPUTING'
    .tpl.init.param.check.FData: no visible binding for global variable
    'PARAM'
    .tpl.init.param.check.FData: no visible global function definition for
    'error'
    .tpl.init.param.check.FData: no visible binding for global variable
    'tpl.init.param'
    .tpl.init.param.check.FData: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.init.param.check.FData: no visible global function definition for
    '.check.param.value'
    .tpl.init.param.check.FData: no visible binding for '<<-' assignment to
    'errors'
    .tpl.init.param.check.FData: no visible binding for global variable
    'errors'
    .tpl.init.param.check.FData: no visible binding for global variable
    '.error'
    .tpl.init.param.check.LocalFunction: no visible global function
    definition for 'whisper'
    .tpl.init.param.check.LocalFunction: no visible binding for global
    variable 'QPARAM'
    .tpl.init.param.check.LocalObject: no visible global function
    definition for 'whisper'
    .tpl.init.param.check.LocalObject: no visible binding for global
    variable 'QPARAM'
    .tpl.init.param.check.LocalObject: no visible binding for global
    variable 'PARAM'
    .tpl.init.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to '.error'
    .tpl.init.param.check.SamplingScheme: no visible global function
    definition for 'whisper'
    .tpl.init.param.check.SamplingScheme: no visible binding for global
    variable 'QPARAM'
    .tpl.init.param.check.SamplingScheme: no visible binding for global
    variable 'IMPUTING'
    .tpl.init.param.check.SamplingScheme: no visible binding for global
    variable 'PARAM'
    .tpl.init.param.check.SamplingScheme: no visible global function
    definition for 'error'
    .tpl.init.param.check.SamplingScheme: no visible binding for global
    variable 'tpl.init.param'
    .tpl.init.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to 'PARAM'
    .tpl.init.param.check.SamplingScheme: no visible global function
    definition for '.check.param.value'
    .tpl.init.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to 'errors'
    .tpl.init.param.check.SamplingScheme: no visible binding for global
    variable 'errors'
    .tpl.init.param.check.SamplingScheme: no visible binding for global
    variable '.error'
    .tpl.init.sampler.RawCode: no visible binding for global variable
    'code.init.sampler'
    .tpl.init.sampler.SamplerCheck : .check.param.value: no visible global
    function definition for 'error'
    .tpl.init.trace.Trace: no visible binding for global variable
    'QTRACEPARAM'
    .tpl.init.trace.Trace: no visible binding for global variable 'n.iter'
    .tpl.init.trace.Trace: no visible binding for global variable 'silent'
    .tpl.init.updater.DFunction: no visible binding for '<<-' assignment to
    'UPDATEFUN'
    .tpl.init.updater.DFunction : <anonymous>: no visible binding for
    global variable 'CODEUPDATE'
    .tpl.init.updater.Gibbs: no visible binding for '<<-' assignment to
    'UPDATEFUN'
    .tpl.init.updater.Gibbs : <anonymous>: no visible binding for global
    variable 'CODEUPDATE'
    .tpl.init.updater.Metropolis: no visible binding for '<<-' assignment
    to 'UPDATEFUN'
    .tpl.init.updater.Metropolis: no visible global function definition for
    'MAKEUPDATEFUN'
    .tpl.proposal.Gaussian.Metropolis: no visible binding for global
    variable 'PARAM'
    .tpl.proposal.Gaussian.Metropolis: no visible binding for global
    variable 'Sigma.jump.eigen'
    .tpl.proposal.Gaussian.SMetropolis: no visible binding for global
    variable 'PARAM'
    .tpl.proposal.Gaussian.SMetropolis: no visible binding for global
    variable 'Sigma.scale'
    .tpl.proposal.PMetropolis: no visible binding for global variable
    'PARAM'
    .tpl.proposal.PMetropolis: no visible binding for global variable
    'Sigma.jump.eigen'
    .tpl.proposal.PMetropolis: no visible binding for global variable
    'BYCOL'
    .tpl.proposal.PSMetropolis: no visible binding for global variable
    'PARAM'
    .tpl.proposal.PSMetropolis: no visible binding for global variable
    'Sigma.scale'
    .tpl.proposal.normal.PMetropolis: no visible binding for global
    variable 'PARAM'
    .tpl.proposal.normal.PMetropolis: no visible binding for global
    variable 'Sigma.jump.eigen'
    .tpl.proposal.normal.PMetropolis: no visible binding for global
    variable 'BYCOL'
    .tpl.reject.Metropolis: no visible global function definition for
    '.logpost'
    .tpl.reject.Metropolis: no visible binding for global variable 'PARAM'
    .tpl.reject.Metropolis: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.reject.Metropolis: no visible global function definition for
    'proposal'
    .tpl.reject.Metropolis: no visible global function definition for
    'error'
    .tpl.reject.Metropolis: no visible binding for global variable 'QPARAM'
    .tpl.reject.PMetropolis: no visible global function definition for
    '.logpost'
    .tpl.reject.PMetropolis: no visible binding for global variable 'PARAM'
    .tpl.reject.PMetropolis: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.reject.PMetropolis: no visible global function definition for
    'proposal'
    .tpl.reject.PMetropolis: no visible binding for global variable 'len'
    .tpl.reject.PSMetropolis: no visible global function definition for
    '.logpost'
    .tpl.reject.PSMetropolis: no visible binding for global variable
    'PARAM'
    .tpl.reject.PSMetropolis: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.reject.PSMetropolis: no visible global function definition for
    'proposal'
    .tpl.reject.PSMetropolis: no visible global function definition for
    'error'
    .tpl.reject.PSMetropolis: no visible binding for global variable
    'QPARAM'
    .tpl.reject.PSMetropolis: no visible binding for global variable 'len'
    .tpl.set.env.SamplingScheme: no visible binding for global variable
    'Umacs'
    .tpl.set.env.SamplingScheme: no visible binding for global variable
    'chain'
    .tpl.set.env.SamplingScheme: no visible binding for '<<-' assignment to
    'Umacs'
    .tpl.start.chain.Trace: no visible binding for global variable
    'INITFUN'
    .tpl.start.chain.Trace: no visible binding for '<<-' assignment to
    'INITFUN'
    .tpl.start.chain.Trace: no visible global function definition for
    'UPDATEFUN'
    .tpl.start.chain.Trace: no visible binding for global variable 'n.iter'
    .tpl.update.param.DFunction: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.update.param.DFunction: no visible global function definition for
    'UPDATEFUN'
    .tpl.update.param.Gibbs: no visible binding for '<<-' assignment to
    'PARAM'
    .tpl.update.param.Gibbs: no visible global function definition for
    'UPDATEFUN'
    .tpl.update.param.Metropolis: no visible global function definition for
    'UPDATEFUN'
    .tpl.update.param.RawCode: no visible binding for global variable
    'code.update'
    .tpl.update.param.Trace: no visible binding for global variable
    'INITFUN'
    .tpl.update.param.Trace: no visible binding for '<<-' assignment to
    'INITFUN'
    .tpl.update.param.Trace: no visible global function definition for
    'UPDATEFUN'
    .tpl.update.param.Trace: no visible binding for global variable
    'TRACEPARAM'
    .tpl.update.param.Trace: no visible binding for global variable 'chain'
    .tpl.update.param.check.DFunction: no visible binding for '<<-'
    assignment to 'verbose'
    .tpl.update.param.check.DFunction: no visible binding for '<<-'
    assignment to '.error'
    .tpl.update.param.check.DFunction: no visible global function
    definition for 'whisper'
    .tpl.update.param.check.DFunction: no visible binding for global
    variable 'QPARAM'
    .tpl.update.param.check.DFunction: no visible binding for global
    variable 'tpl.update.param'
    .tpl.update.param.check.DFunction: no visible global function
    definition for 'error'
    .tpl.update.param.check.DFunction: no visible binding for '<<-'
    assignment to 'PARAM'
    .tpl.update.param.check.DFunction: no visible binding for '<<-'
    assignment to 'errors'
    .tpl.update.param.check.DFunction: no visible binding for global
    variable 'errors'
    .tpl.update.param.check.DFunction: no visible binding for global
    variable '.error'
    .tpl.update.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to 'verbose'
    .tpl.update.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to '.error'
    .tpl.update.param.check.SamplingScheme: no visible binding for global
    variable 'PARAM'
    .tpl.update.param.check.SamplingScheme: no visible global function
    definition for 'whisper'
    .tpl.update.param.check.SamplingScheme: no visible binding for global
    variable 'QPARAM'
    .tpl.update.param.check.SamplingScheme: no visible binding for global
    variable 'tpl.update.param'
    .tpl.update.param.check.SamplingScheme: no visible global function
    definition for 'error'
    .tpl.update.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to 'PARAM'
    .tpl.update.param.check.SamplingScheme: no visible global function
    definition for '.check.param.value'
    .tpl.update.param.check.SamplingScheme: no visible binding for global
    variable '.error'
    .tpl.update.param.check.SamplingScheme: no visible binding for '<<-'
    assignment to 'errors'
    .tpl.update.param.check.SamplingScheme: no visible binding for global
    variable 'errors'
    .tpl.update.param.timer.SamplingScheme: no visible binding for global
    variable 'tpl.update.param'
    .tpl.update.param.timer.SamplingScheme: no visible binding for '<<-'
    assignment to '.Umacs.timer.local'
    .tpl.update.param.timer.SamplingScheme: no visible binding for global
    variable '.Umacs.timer.local'
    Data: no visible global function definition for 'error'
    Sampler.example : <anonymous>: no visible binding for global variable
    'theta'
    SamplerCheck: no visible binding for '<<-' assignment to '.sc'
    monitor.mcts: no visible global function definition for '.monitor'
  • checking Rd files ... OK
    •
  • checking Rd cross-references ... OK
    •
  • checking for missing documentation entries ... OK
    •
  • checking for code/documentation mismatches ... OK
    •
  • checking Rd \usage sections ... OK
    •
  • creating Umacs-Ex.R ... OK
    •
  • checking examples ... OK
    •
  • checking package vignettes in 'inst/doc' ... OK
    •
  • creating Umacs-manual.tex ... OK
    •
  • checking Umacs-manual.tex using pdflatex ... OK
    •
  • elapsed time (check, wall clock): 0:38