• using R version 2.8.0 (2008-10-20)
  • using session charset: ASCII
  • checking for file 'PBSmodelling/DESCRIPTION' ... OK
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  • this is package 'PBSmodelling' version '2.01'
  • checking package name space information ... OK
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  • checking package dependencies ... OK
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  • checking if this is a source package ... OK
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  • checking for executable files ... OK
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  • checking whether package 'PBSmodelling' can be installed ... OK
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  • checking package directory ... OK
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  • checking for portable file names ... OK
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  • checking for sufficient/correct file permissions ... OK
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  • checking DESCRIPTION meta-information ... OK
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  • checking top-level files ... OK
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  • checking index information ... OK
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  • checking package subdirectories ... OK
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  • checking R files for non-ASCII characters ... OK
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  • checking R files for syntax errors ... OK
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  • checking whether the package can be loaded ... OK
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  • checking whether the package can be loaded with stated dependencies ... OK
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  • checking whether the name space can be loaded with stated dependencies ... OK
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  • checking for unstated dependencies in R code ... OK
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  • checking S3 generic/method consistency ... OK
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  • checking replacement functions ... OK
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  • checking foreign function calls ... OK
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  • checking R code for possible problems ... NOTE
    .CGUIback: no visible binding for global variable 'atEnd'
    .CGUIback: no visible binding for global variable 'talktab'
    .CGUIchooseSection: no visible binding for global variable 'talks'
    .CGUIchooseSection: no visible binding for global variable 'tn'
    .CGUIgo: no visible binding for global variable 'sn'
    .CGUIgo: no visible binding for global variable 'talks'
    .CGUIgo: no visible binding for global variable 'tn'
    .CGUIgo: no visible binding for global variable 'cn'
    .CGUIgo: no visible binding for global variable 'talktab'
    .createWidget: no visible binding for global variable 'tkWidget'
    .createWidget.slideplus : saveSlideBounds: no visible binding for '<<-'
    assignment to 'minVal'
    .createWidget.slideplus : saveSlideBounds: no visible binding for '<<-'
    assignment to 'curVal'
    .createWidget.slideplus : saveSlideBounds: no visible binding for '<<-'
    assignment to 'maxVal'
    .createWidget.slideplus : saveSlideBounds: no visible binding for
    global variable 'minVal'
    .createWidget.slideplus : saveSlideBounds: no visible binding for
    global variable 'curVal'
    .createWidget.slideplus : saveSlideBounds: no visible binding for
    global variable 'maxVal'
    .dClose: no visible binding for global variable '.dwd'
    .dClose: no visible binding for global variable '.dls'
    .getPrefix: no visible binding for global variable 'prefix'
    .loadCRunComparison: no visible binding for global variable 'runs'
    .makeTCGUI: no visible binding for global variable 'talks'
    .makeTCGUI: no visible binding for global variable 'fileList'
    .makeTCGUI: no visible binding for global variable 'buttonList'
    .openFilesFromGUI: no visible binding for global variable 'fileList'
    .openFilesFromGUI: no visible binding for global variable 'tn'
    .parseTalk: no visible global function definition for 'error'
    .parseTalk: no visible binding for global variable 'tagType'
    .parseTalk: no visible binding for global variable 'opts'
    .runChunk: no visible binding for global variable 'tn'
    .runChunk: no visible binding for global variable 'talks'
    .runTalk: no visible binding for global variable 'tn'
    .runTalk: no visible binding for global variable 'talks'
    .sortHelperActive: no visible binding for global variable 'PBS.history'
    .sortHelperActive: no visible binding for '<<-' assignment to
    'PBS.history'
    .updateHistory: no visible binding for global variable 'PBS.history'
    addHistory: no visible binding for global variable 'PBS.history'
    addHistory: no visible binding for '<<-' assignment to 'PBS.history'
    backHistory: no visible binding for global variable 'PBS.history'
    backHistory: no visible binding for '<<-' assignment to 'PBS.history'
    calcMin : Sfun: no visible binding for '<<-' assignment to 'PBSmin'
    calcMin : Sfun: no visible binding for global variable 'PBSmin'
    calcMin: no visible binding for '<<-' assignment to 'PBSmin'
    calcMin: no visible binding for global variable 'PBSmin'
    clearHistory: no visible binding for global variable 'PBS.history'
    clearHistory: no visible binding for '<<-' assignment to 'PBS.history'
    createWin: no visible binding for global variable 'PBS.history'
    createWin: no visible binding for '<<-' assignment to 'PBS.history'
    exportHistory: no visible binding for global variable 'PBS.history'
    firstHistory: no visible binding for global variable 'PBS.history'
    forwHistory: no visible binding for global variable 'PBS.history'
    forwHistory: no visible binding for '<<-' assignment to 'PBS.history'
    getChoice: no visible binding for global variable 'blist'
    importHistory: no visible binding for global variable 'PBS.history'
    importHistory: no visible binding for '<<-' assignment to 'PBS.history'
    jumpHistory: no visible binding for global variable 'PBS.history'
    jumpHistory: no visible binding for '<<-' assignment to 'PBS.history'
    lastHistory: no visible binding for global variable 'PBS.history'
    presentTalk: no visible binding for global variable 'talks'
    presentTalk: no visible binding for global variable 'tn'
    rmHistory: no visible binding for global variable 'PBS.history'
    rmHistory: no visible binding for '<<-' assignment to 'PBS.history'
    runDemos: no visible binding for '<<-' assignment to '.dwd'
    runDemos: no visible binding for '<<-' assignment to '.dls'
    runDemos: no visible binding for '<<-' assignment to 'xxy'
    runDemos: no visible binding for '<<-' assignment to 'xx'
    runExamples: no visible binding for '<<-' assignment to '.runExHelper'
    runExamples : <anonymous>: no visible global function definition for
    '.runExHelperQuit'
    runExamples: no visible binding for '<<-' assignment to
    '.runExHelperQuit'
    runExamples : <anonymous>: no visible binding for global variable
    '.cwd'
    runExamples : <anonymous>: no visible binding for global variable
    '.cls'
    runExamples: no visible binding for '<<-' assignment to '.cls'
    runExamples: no visible binding for '<<-' assignment to '.cwd'
    showVignettes: no visible binding for '<<-' assignment to '.dwd'
    showVignettes: no visible binding for '<<-' assignment to '.dls'
    showVignettes: no visible binding for '<<-' assignment to 'xxy'
    showVignettes: no visible binding for '<<-' assignment to 'xx'
    sortHistory: no visible binding for global variable 'PBS.history'
    testWidgets: no visible binding for '<<-' assignment to
    '.testWidHelper'
    testWidgets : <anonymous>: no visible binding for global variable 'wN'
  • checking Rd files ... OK
    •
  • checking Rd cross-references ... OK
    •
  • checking for missing documentation entries ... OK
    •
  • checking for code/documentation mismatches ... OK
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  • checking Rd \usage sections ... OK
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  • checking data for non-ASCII characters ... OK
    •
  • checking line endings in C/C++/Fortran sources/headers ... OK
    •
  • checking line endings in Makefiles ... OK
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  • checking for portable use of $BLAS_LIBS ... OK
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  • creating PBSmodelling-Ex.R ... OK
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  • checking examples ... OK
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  • checking package vignettes in 'inst/doc' ... NOTE
    *** PDFLaTeX Errors ***
    File /Builds/Rdev-web/QA/Simon/packages/tiger-universal/results/2.8/PBSmodelling.Rcheck/inst/doc/PBSmodellingIntro.Rnw :
    Running 'texi2dvi' on 'PBSmodellingIntro.tex' failed.
  • creating PBSmodelling-manual.tex ... OK
    •
  • elapsed time (check, wall clock): 0:39